Colletotrichum higginsianum: CH63R_07993
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Entry
CH63R_07993 CDS
T08176
Name
(RefSeq) Ricin b lectin
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_07993
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CH63R_07993
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
28867074
NCBI-ProteinID:
XP_018157745
UniProt:
A0A1B7YBF3
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Position
5:3727562..3728672
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AA seq
327 aa
AA seq
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MTQVSSCLTLLLAVLPALGAGAATNVTCAKCDDVAHGFASLNGGTTGGKGGRIVTATSHA
ELVEYANATEPLIIRVEGELTSEPRGYEIPIRSNKTIVGVGAGAKILGGGFGITNQSNII
LRNLQVSDTYIPEDYNGKSEDWDGIQVDKGTNLWIDHVTFARMADGLMDLRRDTDYVTVS
NCLFSSHNKAFGIGWTPNVISKMTINDNFFNSTNQRNPSADNLLMCHMYNNYFLNVTSYG
NYARGHTALLVETSYFERVNDPVVAGPNATIRSNWLKFKDCTGETHLDVNGGAVFNATDY
YSYSLKDPYDLPTTIPPFVGPRPDIGI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggtcagctcctgtctcactctgctgctcgcggtcctcccggctctcggggcc
ggtgcggcaaccaacgtcacatgcgccaagtgcgacgacgtagcccacggcttcgcctcg
ctcaacggcggcacgaccggcggcaagggcggccggatcgtcacggcgacctcacacgcg
gaactggtggagtacgccaacgcgacggagccgctgatcatccgcgtcgagggcgagctc
acctcggagccgagggggtacgagatccccatcaggagcaacaagaccatcgtcggggtc
ggcgccggcgccaagatcctcggcggcgggttcggcatcaccaaccagagcaacatcatc
ctcaggaacctgcaggtcagcgacacgtacatccccgaggactacaacggcaagtcggaa
gattgggatggcatacaggtcgataaagggaccaacctctggatcgaccatgtcaccttc
gcccgcatggccgacggcctcatggacctccgcagagacacggactacgtcacggtgtcc
aactgcctcttctcgtcgcacaacaaggcgttcgggatcggctggacgcccaacgtcatc
tccaagatgaccatcaacgacaacttcttcaactcgacgaaccagcggaacccgtcggcg
gacaacctgctcatgtgccacatgtacaacaactacttcctcaacgtcacgtcgtacggc
aactacgcgcgcggccacacggcgctgctggtcgagacgagctacttcgagcgggtcaac
gaccccgtcgtcgcgggcccgaacgcgacgatccgcagcaactggctcaagttcaaggac
tgcaccggcgagacgcacctggacgtcaacgggggcgccgtgttcaacgcgacggactac
tattcgtattcgctcaaggacccgtacgacttgccgaccacgattcccccgtttgtaggg
cctcggccggatattggcatctga
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