Colletotrichum higginsianum: CH63R_08142
Help
Entry
CH63R_08142 CDS
T08176
Name
(RefSeq) AMP-binding enzyme
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00061
Fatty acid biosynthesis
chig00071
Fatty acid degradation
chig01100
Metabolic pathways
chig01212
Fatty acid metabolism
chig04146
Peroxisome
Module
chig_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CH63R_08142
00071 Fatty acid degradation
CH63R_08142
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CH63R_08142
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
chig01004
]
CH63R_08142
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chig04147
]
CH63R_08142
Enzymes [BR:
chig01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CH63R_08142
Lipid biosynthesis proteins [BR:
chig01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CH63R_08142
Exosome [BR:
chig04147
]
Exosomal proteins
Exosomal proteins of breast milk
CH63R_08142
Exosomal proteins of breast cancer cells
CH63R_08142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
28867223
NCBI-ProteinID:
XP_018157894
UniProt:
H1UZL4
LinkDB
All DBs
Position
5:complement(4262591..4264894)
Genome browser
AA seq
691 aa
AA seq
DB search
MDWTKGIMPLHQVHKPPFTVESPGYERVDGETLPRRHWKAKDGLRTQPHPDIRTVYDIVK
RSAQVYANEPAVGTRKLVHLHKEKKKVPKNVDGQVIEVEKEWQFFELSRYSYLTYADLLT
YINQIGSGLRKLGLSKGSRVHLFATTTANWMAMSHACGSQSISIVTAYDTLGASGVEHSL
LQSDAEAMYIDPQLLKTAAGALKKADKVKFVVYNNNSLFSDGTEVDAFRKANPDIKLISI
EEVRALGEENPVDTVEPKPDELFCIMYTSGSTGPPKGVPMTHGGTVAAITGLYTCVEECV
SHREYVLAYLPLAHIFELVLENLVLFAGGTLGYGNPRTLSDTSVKNCAGDMREFRPTALV
GVPQVWETVKKGIMAKVNSSGPLIKALFWSAFNYKTFMVKHGLPGATLFDNIVFKKVRDM
TGGRLRFIMNGASGISDGTKHFLSMTVAPMLTGYGLTETAANGALGDPLEYTSTSIGSIP
AAVDLKLVSIPDLNYYADSNPPQGEIWIKGLPVLKEYYMNPEETAKAITKDGWFKTGDIG
EFDSVGHVRVIDRVKNLVKMQGGEYIALEKLETVYRGSPFVANLMVYGDGEHSRAIAVIA
PNEKALAEEAQKLGVDEHSMHTHKKVVDAVHKDLVALGRKAGLTGLEIIGGVVLTEEEWT
PDSGLVTATQKVNRRVIREKYKSQMEKAFTD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggactggaccaagggtatcatgcccctgcaccaggtgcacaaacctcctttcactgtc
gagtcgcccggctacgaacgcgtcgacggcgagactctcccccgccgccactggaaggcc
aaggatgggttacgaacgcaacctcatcccgacattcgtacagtctacgacattgtcaag
cggagtgcgcaagtctacgccaacgaacccgctgtcggtacccgtaagctcgtgcatctt
cacaaggagaagaagaaggtgcccaagaacgtcgatgggcaggtcatagaggtcgagaag
gagtggcagttcttcgagctgtccaggtactcatacctgacctacgccgatcttctcacc
tacatcaaccaaattggctcgggcctccgcaagttgggtctgagcaaaggcagcagagtc
cacctgtttgcgaccacgactgccaactggatggccatgtcccacgcctgcggctcgcag
tccatttccattgtcaccgcttacgacacccttggcgccagcggtgtcgagcactcgctc
ctccaatcggacgctgaggccatgtatattgaccctcagctcctcaagacggcagccgga
gctttgaagaaggccgacaaggtcaagtttgtcgtctacaacaacaactccctcttttcg
gatggcaccgaggtcgacgccttcaggaaggcgaaccccgacatcaagctcatcagcatc
gaagaagtgcgcgcattgggcgaggagaaccccgtcgacaccgtcgagcccaagcctgat
gaactgttttgcatcatgtatacctccggttccactggcccgcccaagggcgtgcccatg
acacacggaggtaccgtggcggcgatcactggcctctacacctgcgtcgaagaatgtgtt
agccacagggagtacgtcctggcatatttacctctggcccacatctttgagctcgttctc
gagaatcttgttctctttgccggtggcaccctgggctatggcaaccctagaaccctctcc
gacacttcggtcaagaactgcgctggtgacatgcgcgaatttcggccgacggccctggtc
ggcgtgccccaggtctgggagacggtgaagaagggcattatggccaaggtcaacagttct
ggtcctctcatcaaggccctcttctggagcgccttcaactacaagaccttcatggtcaag
catggcctcccaggcgctactctttttgacaacatcgtcttcaagaaggtgcgtgacatg
acgggtggccgtcttcgcttcattatgaacggcgcgagcggcatctcggacgggacgaag
cacttcctctccatgactgtggcccctatgttgactggctatggtctgaccgagacggct
gccaacggtgcccttggcgaccccctcgagtacacatctactagtattggatctatccct
gctgccgtcgacctcaagctcgtctccatcccagacctcaactactacgccgactcgaac
ccgcctcagggcgaaatctggatcaagggtctgcctgtgctgaaagagtactacatgaac
ccggaggagacggccaaggccatcaccaaggatggctggtttaagacgggtgacattgga
gaattcgactctgtcggccatgtgcgcgttatcgaccgcgtcaagaacctcgtcaagatg
caaggaggagagtacatcgctctcgagaaactcgagactgtctaccgcggcagccccttt
gtagccaacctcatggtttacggagacggcgagcactctcgtgccattgccgtcatcgcc
cccaacgaaaaggctcttgccgaagaggcgcagaagcttggcgtcgacgagcacagcatg
cacactcataagaaggttgttgatgccgtgcacaaggacctcgtggcgctcggccgaaag
gctggtctgacgggccttgagatcatcggcggtgtcgtcctgactgaagaggaatggacc
ccggacagcggcctcgtcaccgccacccaaaaggtcaacaggagagtcatcagggaaaag
tacaagtctcagatggaaaaggccttcaccgactaa
DBGET
integrated database retrieval system