Colletotrichum higginsianum: CH63R_08521
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Entry
CH63R_08521 CDS
T08176
Name
(RefSeq) WD repeat domain-containing protein
KO
K14298
mRNA export factor
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_08521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_08521
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_08521
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CH63R_08521
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CH63R_08521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_1st
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_ACSF4
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
WD40_like
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_RSE1_2nd
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
28867602
NCBI-ProteinID:
XP_018155518
UniProt:
H1VFR0
LinkDB
All DBs
Position
6:395331..396535
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AA seq
358 aa
AA seq
DB search
MSGLFGSASSSSSSNTVGDLKQDIALSNPPEDSISDLAFSPAQNQASDFLAVASWDKKVR
IYEIAQNGQSEGRHAYEHDGPVLNCDFSKDGTKVLSGGADKAVKACDLASQQTIKIGEHE
QPVKCVRFFDSANGTMAVSGSWDKTVKYWDMRSPTPAATLTCQERVYSIDVRNDLLVIGT
ADRYINVVDLKNPTKFYKTLQSPLKWQTRVVSCFTDGAGFAIGSIEGRCAIQYVEDKDAS
SNFSFKCHRDPPANNVTNVYAVNDISFHPVHGTFSTAGSDGTFHFWDKDAKHRLKGYPNV
GGSITATTFNKNGSIFAYGISYDWSKGFQHNTQQYPIKVMLHPVQADECKPRPTMKKR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcctgttcggcagcgcgtcctcttcttcgtcgagcaacactgttggcgacctg
aagcaggacattgcgctcagcaaccccccggaagacagcatctccgatcttgccttctcg
cccgctcagaaccaggccagcgacttcttggcagtggccagttgggataagaaggtcagg
atatacgagattgcacagaacggccagagcgagggacgacacgcctacgaacacgatgga
cccgtgttaaactgcgacttctccaaggatggcacaaaggtcctctccggcggcgccgat
aaggccgtcaaggcgtgtgacctcgcgtctcagcaaacgatcaagatcggcgagcacgag
cagccggtcaagtgcgtccgcttcttcgactcggccaacggcaccatggccgtgtcgggc
tcttgggacaagacggtcaagtactgggacatgcggtcgcccacaccggcggcgacgctg
acgtgccaggagcgcgtgtactcgattgacgtgcgcaacgacctactcgtcattggcacg
gccgaccgatacatcaatgttgtcgacctcaagaaccccacaaagttctacaagacactt
cagagcccgctcaagtggcagaccagagtcgtcagctgcttcaccgacggcgccggtttt
gctattggcagtatcgagggccgctgtgcgatccagtatgtcgaggataaggatgctagc
tccaacttttccttcaagtgccaccgtgaccccccggcgaacaatgtcacaaacgtctac
gctgtcaacgacatatccttccaccccgtgcatggtaccttcagcaccgccggctcggac
ggcaccttccatttctgggacaaggacgcgaagcaccgtctgaagggatacccgaacgtc
ggtggtagcatcacggcgacgaccttcaacaagaacggatccatctttgcgtacggcatc
agctacgactggagcaagggtttccagcacaacactcagcagtaccccatcaaggtgatg
cttcaccccgtacaggcggacgagtgtaagcctcgcccgacgatgaagaagcggtga
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integrated database retrieval system
