Colletotrichum higginsianum: CH63R_08706
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Entry
CH63R_08706 CDS
T08176
Name
(RefSeq) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH63R_08706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_08706
Enzymes [BR:
chig01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CH63R_08706
DNA repair and recombination proteins [BR:
chig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CH63R_08706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
28867787
NCBI-ProteinID:
XP_018155703
UniProt:
H1VER5
LinkDB
All DBs
Position
6:complement(960201..961328)
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AA seq
375 aa
AA seq
DB search
MATRRSSRLSAQADTMMAPPPVAPVATKSRKRKSAAEPTLTDPVPSSDPVTPPRKRGPKV
APVTPIPPPITPTPSAVGIIAERVNRTAKAKVKAVNRLADPKLTNAPVISPETSRIIASH
PAEDSSPSKAPAAASATGGGKHTTTSSILEEACRHLIQVEPRMKPLIEKNHCRVFSPEGL
AEKIDPFESLCSGIISQQVSGAAARSIKNKFVALFTEDGSDGESKGFPHPSEVAAASIEH
LRTAGLSQRKAEYVKGLAEKFVSGELSAQMLAESPYEEVRDRLIAVRGLGLWSVEMFACF
GLKRMDVFSLGDLGVQRGMAAFAGRDVAKLKAKGGKWKYMSEKEMVEMASRFAPYRSVFM
WYMWRVEETDISTLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccggcgctcatctcgtctgagcgctcaggcggacaccatgatggcgccccct
cctgtcgcaccagtggccaccaagagccgaaagagaaaatctgcggcagaacctacactc
acagacccggtgccgtcctcggaccccgtgacacccccgagaaaacggggcccgaaagtt
gctcccgtcaccccgatccctccgccgatcacgcccaccccgagcgccgtcggcatcatc
gctgaacgggtgaaccgcaccgctaaggccaaggtgaaggctgttaaccgccttgctgat
ccgaagctcacaaacgcacccgtcatctcgcccgagacctcgcgaataatcgcctctcat
cccgccgaggactcgtccccgtccaaggcacccgcggcagcttccgccactggaggcggg
aaacacactacgacttcaagcattcttgaggaagcatgccggcatcttatacaggtcgaa
ccgcgtatgaaacctctcatcgagaagaatcattgccgcgtgttctcgcccgagggcctg
gccgagaagatcgatccctttgagagcctctgcagcggtatcatctcacaacaggtgtcc
ggcgccgccgcaaggtccatcaagaacaagttcgttgccctcttcacggaagacggttcc
gatggcgagtccaaggggttcccccatccctcggaggtggcggccgcttccatcgagcac
ctccgtaccgccggcctgtcgcagcgcaaggccgagtacgtcaagggcctggccgagaag
ttcgtgagtggcgagttaagcgcgcagatgctggcggaatctccctatgaagaggtgcgg
gacaggctcatcgcagtgaggggtctagggctttggtcggtcgagatgttcgcctgcttc
gggctcaagaggatggacgtgttttcgctgggcgacctcggcgtgcagagaggcatggcg
gcctttgccggacgggatgtggccaagctcaaagccaagggcggcaagtggaagtatatg
tcggaaaaggagatggtcgagatggcgagccgcttcgcgccatatcgcagcgtcttcatg
tggtacatgtggagggtcgaggaaaccgatataagcactctggagtaa
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