Colletotrichum higginsianum: CH63R_08926
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Entry
CH63R_08926 CDS
T08176
Name
(RefSeq) Transcription factor TFIIH complex subunit Tfb5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
chig
Colletotrichum higginsianum
Pathway
chig03022
Basal transcription factors
chig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CH63R_08926
09124 Replication and repair
03420 Nucleotide excision repair
CH63R_08926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_08926
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_08926
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CH63R_08926
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CH63R_08926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
28868007
NCBI-ProteinID:
XP_018155923
UniProt:
A0A1B7Y629
LinkDB
All DBs
Position
6:1691423..1691852
Genome browser
AA seq
91 aa
AA seq
DB search
MPRAIRGVLIECDPSIKSIIVNIDSNNHDYIIEDLDDQHVVVKENMVAALKRQLDEVGSR
FPIPDSRFRPSPEHSAGTVEGDAAARRKFGL
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgccatcagaggagtcctcatcgagtgcgacccctccatcaagtccatcatc
gtcaacatcgactccaacaaccacgactacatcatcgaggacctcgacgaccagcacgtc
gttgtcaaggagaacatggtcgccgccctcaagagacagcttgacgaggttggttcccga
ttcccgattcccgattcccgattccgtccatctccggaacattctgcagggacggttgaa
ggagacgcagcagcccgacgaaagttcggactctga
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