KEGG   Colletotrichum higginsianum: CH63R_08993
Entry
CH63R_08993       CDS       T08176                                 
Name
(RefSeq) breast carcinoma amplified sequence 2
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
chig  Colletotrichum higginsianum
Pathway
chig03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CH63R_08993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:chig03041]
    CH63R_08993
   03400 DNA repair and recombination proteins [BR:chig03400]
    CH63R_08993
Spliceosome [BR:chig03041]
 Complex B
  Other components
   Prp19 complex
    CH63R_08993
 Complex C
   Prp19-CDC5 complex
    CH63R_08993
DNA repair and recombination proteins [BR:chig03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CH63R_08993
SSDB
Motif
Pfam: BCAS2 PccH
Other DBs
NCBI-GeneID: 28868074
NCBI-ProteinID: XP_018155990
UniProt: H1V8A8
LinkDB
Position
6:complement(1939273..1939965)
AA seq 208 aa
MSALNAFHESLPYIDDEPTPAEREAAESLIRAELSRSSPKPAPTYEEPTFSPLIELELER
IASQQPLKAVDLERYQTQEPFADSGELSTPEDRQRLADALQKAYISYTYLDARAQNLSLL
DKWGKNAWLIGNWELENELKTLERDLAETRRLIDVLTVARRRQQEEVAAEMKGLEETWKK
GVGRTLETEIAVEQLRRDVLEELRVRGA
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtccgccctgaacgccttccacgagtctcttccatacattgatgacgagcccacacca
gcggaacgcgaagctgccgagtccctgatcagggccgagctatccagatcttcaccgaaa
cctgcaccgacttacgaagaaccaaccttctctcctcttatcgagctcgagctcgagcgt
attgcctcccaacaacccctcaaggccgtcgacctcgaacgctaccaaacacaggagcct
ttcgcggactccggggaactatcgacaccagaggaccgccagcgtcttgccgacgctctt
caaaaggcatacatttcctatacctatctcgatgcccgtgctcagaacctcagtttgctg
gacaaatggggcaagaatgcctggctaattggcaactgggaactcgagaatgaactcaag
actctcgagcgggatctcgccgaaacgaggcgtttgattgatgtattgactgttgctcgt
cggcggcagcaggaggaggtggcagctgagatgaaggggctagaagagacttggaagaag
ggggttggaagaactttggagaccgagattgccgtggagcaactgaggagggatgtcctg
gaagagttgagagtaagaggggcttaa

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