Colletotrichum higginsianum: CH63R_09085
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Entry
CH63R_09085 CDS
T08176
Name
(RefSeq) RNA recognition domain-containing protein
KO
K14396
polyadenylate-binding protein 2
Organism
chig
Colletotrichum higginsianum
Pathway
chig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CH63R_09085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_09085
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CH63R_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_occluded
RBD_DEAH11
DUF724
PRKG1_interact
V_ATPase_I
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
28868166
NCBI-ProteinID:
XP_018156082
UniProt:
H1V5E1
LinkDB
All DBs
Position
6:complement(2279777..2280533)
Genome browser
AA seq
203 aa
AA seq
DB search
MADVKPENTTVEDHNPEQNDSNENNSVGEEDGHDEEEISAMKRRVAEMEEEAAKLREMQA
SLDQQSRELSENKEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQPK
GYAYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNVPGMSRGRGRGGARGGRGGFGRG
GFPPRGGYRGGYRGRGRGGFTPY
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtcaagcccgaaaacaccactgtggaggaccacaaccctgagcaaaacgac
agcaatgagaacaacagcgtcggcgaggaagacggccacgatgaggaggagatatctgcg
atgaagagacgggtagccgagatggaagaggaggcagccaaactgcgcgagatgcaagcc
agcctcgaccagcagagtcgggagctgtcggagaacaaggaggacatcgacagccgcagt
atttttgtcggcaacgtcgactactccgcctcgcctgaagagatccaggcccacttccag
agctgcggctcgatcaaccgagttaccatcttattggacaagtttactggacagccgaag
ggatacgcttacgtcgagtttaccgagccgagtctcgtcgcccaggccctcgtcctcaac
gagagcgtctttaagggccgcaacatcaaggtcgtccccaagcgcaccaacgtccccggc
atgtcccgcggtcgcggacgtggtggcgcgcgcggaggtcgcggcggtttcggtcgcggc
gggttcccccctcgaggcggctaccgtggaggctaccgtggccgaggaagaggaggattc
actccctattag
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