Colletotrichum higginsianum: CH63R_09182
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Entry
CH63R_09182 CDS
T08176
Name
(RefSeq) Nuclear polyadenylated RNA-binding protein
KO
K14411
RNA-binding protein Musashi
Organism
chig
Colletotrichum higginsianum
Pathway
chig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CH63R_09182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_09182
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CH63R_09182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
28868263
NCBI-ProteinID:
XP_018156179
UniProt:
H1V1Z4
LinkDB
All DBs
Position
6:2582702..2584149
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AA seq
448 aa
AA seq
DB search
MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMVKE
HFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDT
GRPRGFGFVTFESEAGVEACLSTSLEIHGKPIEVKKAQPRGNLREEEEAARRGGKFRKGD
DNAQSGQSGMGGNQMGATGGMTPQVMAQYFQRMQQYFAMMQQQMAMSRGMGPMNPAMMQQ
MMQMQQMQQMQSQMMGRGGGGGNGQQGMMGQMTPQMMQQMQQMQQQMQQQMGQQGGPPSG
PSGSFSPQQQMFDPSQGGQPQQQQQQQQPQQQVAQGPRRGGGGGGGAPRDQYNQAGAYAM
GGGGGAPTSWEGMYDDVPQPNLNQGGRGGYRGGHRGGSHSGGSHQGSPDPAHAPPANAPT
GPKNAGRPGANYRGGGRSGNRGFHPYSR
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgttcattggcggactcaactgggagacaacggatcaatcccttcgagactacttctcc
caatttggagaggtcgtcgaatgcactgttatgagagatagcagcaccggtcggtcaaga
ggcttcggcttcttgacattcagagaccccaagacggtcaatattgttatggtcaaagaa
cactttttggatggcaagattatcgacccaaagcgtgcgattccccgcgatgaacaggag
aagaccagcaagatctttgtcggcggtgtcagccaggagacaacggaccaagaattcaag
gattactttgcccagtttggacgagttgttgacgccaccttgatgatggacaaggacacg
ggtcgccctcgtggtttcggcttcgtcacattcgaaagcgaagccggtgtcgaggcatgc
ctgagcaccagcctggagattcacggcaagccaatcgaggtcaagaaggcccaaccacga
ggcaatctcagggaagaagaagaggctgctcgacgcggcgggaagttcaggaagggcgac
gacaatgctcagagtgggcagagcggtatgggcggcaatcagatgggtgctaccggcggc
atgacgccacaggtcatggcccagtacttccagcgaatgcagcagtacttcgccatgatg
cagcagcagatggccatgagccgtggtatgggcccgatgaacccggcgatgatgcagcag
atgatgcagatgcaacaaatgcagcagatgcaaagccagatgatgggccgcggcggggga
ggcggcaacgggcagcagggaatgatgggccagatgacgcctcagatgatgcagcagatg
caacagatgcagcagcagatgcagcagcagatgggacagcagggcgggccgccatccggg
cccagcggtagcttcagtccgcagcagcagatgttcgacccgtcccaggggggccagcca
cagcagcaacagcagcagcagcagccacagcaacaagtcgcccagggcccgcgacgagga
ggtggtggcggtggaggtgcgcctcgcgaccagtacaaccaagccggcgcttatgccatg
ggcggtggtggcggcgccccgacatcttgggaaggcatgtacgacgacgtgcctcagccc
aacctgaaccagggcggccgaggaggttaccgaggtggacaccgcggcggctcccatagc
ggcggttcccaccaaggatcgccggatcccgcgcacgccccgcctgccaacgctcccacg
gggcccaagaacgcgggccgacccggtgccaactaccgcggcggtggccgcagcgggaac
cgcggtttccatccttactcgcgatag
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