Colletotrichum higginsianum: CH63R_09400
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Entry
CH63R_09400 CDS
T08176
Name
(RefSeq) Pseudouridine synthase
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chig03016
]
CH63R_09400
Enzymes [BR:
chig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
CH63R_09400
Transfer RNA biogenesis [BR:
chig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CH63R_09400
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Ub-Mut7C
PAS_4
Motif
Other DBs
NCBI-GeneID:
28868481
NCBI-ProteinID:
XP_018156397
UniProt:
H1VSJ3
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All DBs
Position
6:3420216..3421649
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AA seq
477 aa
AA seq
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MASDKVKLVSAPASLQTATFPAFVAKPSDMRPSEASETQSDVLTTPTGDMWPRPYYFEDG
LRRVAPYHFTYHTWAKERWRGRKLVDIFEDEFRDRTLEYYRHAMETGAIVVNGKAVGPDH
VVKNGDLVNHTIHRHEPPVTAEPIRVIHEDDEMIVVNKPSGVPVHPAGRYKYNSLIEIMK
AERGEHFLPYPCHRLDRLTSGILFIGKTPQGAVKLTAQIRAHTVRKEYLARVAGKFPDGE
VVCDQPILQISPRLGLNRVRANGKSARTVFKRLAYYPPETQNDSQPQQPKTPEQLAEEER
RPWIKKEGYSIVRCLPLTGRTHQIRVHLQFVGHPIQNDPLYANQRVWGINLGCNDSDAVE
NTDEDIMSRLERMGKQDIADAVAYHDEMVDLYAKRRAEKLSGKNCEICDTPLYTDPGEHE
LSLWLHSLRYEDAGGAWGYTSPMPGWALPPDGMNGPTEVGGLEELVEAIKDGNPEVS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgacaaggtaaagttggtctcggcaccggcttcgttgcaaactgcaacattc
ccggcctttgtggctaagccgtcggatatgcgaccctctgaagcctctgagacgcagtct
gacgtgctgacgactcccactggcgacatgtggccacgtccttactatttcgaggacggt
ctgcgtagagtcgccccctaccacttcacctatcacacctgggccaaagagcgatggcgt
ggccggaaactagtcgatatatttgaagacgagttcagggaccgcacccttgagtattat
cgccacgccatggaaaccggagccatagtcgtcaacgggaaggccgtcgggccggaccat
gtggtcaaaaacggggacctggtgaaccataccatccatcgccacgagcccccagttact
gcagagcccattcgtgttatccacgaagacgatgagatgattgtcgttaacaagccatcc
ggcgtgcctgtgcaccctgctggcagatacaagtacaactcactcatcgaaatcatgaaa
gctgagaggggcgagcacttcctgccgtacccgtgccatcgcctggatcgcctaacaagc
ggtattcttttcatcggcaagacgccgcagggcgccgtcaagctcaccgcgcagatcagg
gctcatacggtgcgcaaggagtatttagcccgcgttgctggaaagtttcccgatggcgaa
gtcgtctgcgatcagcctatcctccagatatccccgcgactaggactcaacagagtacgg
gccaatggaaagtccgctcgtaccgtcttcaagcgtctggcctattacccgccggaaacc
cagaatgactcgcagccgcagcagcccaaaaccccagaacagcttgcggaagaggagcgt
cggccttggattaagaaggagggctactctattgttcgctgcttgcctttgacgggcagg
acgcatcagattcgtgtgcacctgcaatttgtcgggcacccgatccagaacgacccgctg
tacgcaaaccagcgagtctggggcatcaacctgggatgcaacgactcggatgcagttgaa
aacacggacgaagacatcatgtcgcgtctggaacggatgggtaagcaggacattgctgat
gcggtagcatatcatgacgagatggtggacctgtacgcgaagagacgggccgagaagctg
tcagggaaaaactgcgaaatctgcgatacgccgctgtatacggatcccggcgagcatgaa
ttgtcactttggcttcacagcctccggtatgaagacgccggaggcgcatggggctacacc
agcccgatgcccggatgggcgcttcctccggatggcatgaacggaccgacggaggttggt
ggactggaggagttagtggaggctatcaaagacgggaaccctgaagtgtcttga
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