KEGG   Colletotrichum higginsianum: CH63R_09409
Entry
CH63R_09409       CDS       T08176                                 
Name
(RefSeq) WD repeat domain-containing protein
  KO
K12857  Prp8 binding protein
Organism
chig  Colletotrichum higginsianum
Pathway
chig03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CH63R_09409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:chig03041]
    CH63R_09409
Spliceosome [BR:chig03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    CH63R_09409
 Complex C
   U5 SnRNP specific factors
    CH63R_09409
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 28868490
NCBI-ProteinID: XP_018156406
UniProt: H1VHS1
LinkDB
Position
6:complement(3469120..3470352)
AA seq 356 aa
MSAEKRPASDEPGAGQMIVKRQNVGSSTGALARLNASGKSSALVQTAPRTSNLQAPVMEL
SGHSGEIFAAKFDPTGNFIASGSMDRSILLWRTYGDCENYGVLTGHRGAVLDLQWSRDSK
IVYSASADTHLASWDLENGTRIRRYIGHDEIVNTMDISKRGEGMLVSGSDDGTIGLWDPR
SKHAADHIETEFPITAIAMSEAGNEVYSGGIDNDIKVWDIRKKSVVYSMLGHQDTVTSLR
ASPDSQSLLSFAMDSTVRTWDIRPFAPTDRHIRTFDGASVGLEKNLIRASWDSEGKKVAV
GSGDGTATIWSTETGKLMYKLPGHKGTVNCVEFAPGTEPIVLSASSDRNMLLGELR
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgtctgccgaaaaaagaccggcgtccgacgagcctggcgcgggccagatgattgtgaag
cgccagaacgtgggatcgtcaacaggagcgctggcgaggctcaatgcctcgggaaagagc
agcgcattggttcagacggctccccgaacaagcaatctgcaggcaccagtcatggagctc
tccggccactcgggcgagatctttgccgccaagtttgatcctaccggaaacttcattgct
tccggttcgatggatagaagtatcttgttgtggcggacatacggcgactgcgaaaactat
ggcgttcttactggccatcggggcgctgtcctggatcttcaatggtccagagactctaag
atcgtatattcggcttcggccgacacacatctagcaagctgggatcttgagaacggtacg
agaatacgaaggtacattgggcatgacgagattgtgaacacgatggacatcagcaaacga
ggcgagggcatgctggtgagcggtagcgacgacggcacaatagggctttgggacccgaga
tcaaagcacgcggcggatcacattgagacagagttccccatcacagccattgccatgtct
gaggccgggaacgaagtctactcaggcggcatcgacaacgacatcaaggtctgggacata
cgcaagaagtcagttgtgtactccatgcttggccaccaggacacggtcacctccctccga
gcatctccggactcgcaatcgctgctttcatttgccatggactccacggtgagaacatgg
gacattcgtccattcgcaccaacagacagacatatcagaacatttgacggcgcttctgta
gggctcgagaagaacctcattcgagccagctgggattctgagggcaaaaaggtagctgtt
ggttcgggcgacggcactgccactatttggtccactgagaccggcaagctcatgtacaag
cttcctggacacaaggggactgtgaattgtgtcgagtttgcgcctggcacggaacccatc
gtactttctgcgtcatctgatcgcaacatgcttctcggagaactgcggtga

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