Colletotrichum higginsianum: CH63R_09439
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Entry
CH63R_09439 CDS
T08176
Name
(RefSeq) Helicase associated domain-containing protein
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
chig03012
]
CH63R_09439
Enzymes [BR:
chig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CH63R_09439
Translation factors [BR:
chig03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
CH63R_09439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
OB_NTP_bind
HA2_C
AAA_22
DSRM_DHX29
HA2_N
nSTAND3
ABC_tran
AAA_19
AAA_29
AAA_16
NPHP3_N
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
28868520
NCBI-ProteinID:
XP_018156436
UniProt:
H1UWN0
LinkDB
All DBs
Position
6:complement(3606135..3610840)
Genome browser
AA seq
1479 aa
AA seq
DB search
MAGAKKKKKPAANPARGFATTSVASSKPRTEPAEGSETVTTAALNAAVNQDAGPPSDPQS
TSAGAGDKATKTELSPEEFEMQLDESELQLLVEKYAQKTKRDAQRQRTRLETDRRLLRGQ
ADTVNSRKWLPQELMDQVLDLIQAESRFASSSVSTETVASGKLLPEEDMTIKLWTLQQTL
TSVGFPEERVQAVMRHILDIAPNIPSIAKDSLWGLEEALDWMARECPSDELPDYEGRGKQ
GTRQLDTPAESPLPSGATTPRASEPSGRQTGGQRSKKKAVVTCDSDIEPDDLVPVFLETK
AKLFVLQTNQQGKKKQRNGDPAAEEEAGRLAKLHAKIDRIEKDVLFDKFAAEQQWKTQKM
ALEKEAAVARKQRLQEEAEKESENKTEEAAASSDGDINDEAERIAAEIIAQGEDDEDGGL
SDLFANLPVTEVDAAGNSTTVLNGADGVKIAIRDFGKWTGVSPMRALEEACRARDAAAKT
TYRLISEVPFANRHAVSISWSKSQEIPPPSQDDSVEVTAYPSGFTFNMKSVATPDKKQSE
AYVATWALFHIFGTSSKEEKVGMRLPVVWRELWDELAEARKSRLDAKDREAIRELRALVR
QRQDQELEDGVILQSAFKGRGTARNQIDKGDETAQEAAKRLSGGPEYYQNIWALKTNTPR
YQAMLQSRMQLPMWNFKQQVTDAVDREQVVIICGETGCGKSTQVPAFLLEHQLAQGKACK
IYCTEPRRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIV
MRMLEGSNDLREVTHLVLDEVHERSIDSDFLLIILKKLLLRRQDLKVVLMSATVDAERFS
NYLGGAPVLTVPGRTFPVQVRYLEDAIEATGYTVGQTPQEKMVDLDDDVVETTEVEGPKS
IAGADLSAYSAKTRNALAQMDEYRIDFDLIVQLIGKVASDSEYVAYSKAILVFLPGIAEI
RTLNDLLSGDPSFARDWLIYPLHSTIATEDQEAAFLVPPPGMRKIVLATNIAETGITIPD
VTCVIDTGKHREMRFDERRQLSRLIDTFISRANAKQRRGRAGRVQEGLCFHMFTKHRHDT
IMSDQQTPEMLRLSLQDLAIRVKICKIGGIEETLSEALDPPSAKNIRRAVDALIDVRALT
PAEDLTPLGNQLARLPLDVFLGKLILMGAIFKCLDMAITVAAILSSKSPFTAPFGQRAQA
DLVRKGFRRGDSDLLTVYNAYLAWKRVCQSTSASGGKDFQFCRKNFLSQQTLANIEDLKG
QLLVSVADSGFLLLTDDERRALNRLRYGANSRGRRHQNFFDIPQRVSINSENDAITTAVV
AWSFYPKLLVRDNPGSRGLRNVGNNQSITLHPSSVNKGHNELKWLSYYHIMQSKSVYHAH
ETTAADPFAIALLCGDVRADMFAGVLVLDGNRCRFAVPDWKTMLVIKVLRTRLRELLTRS
FKQPGKLPTAQHERWLAIWQKIFSQETNKENGTTAVSKA
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atggccggggccaagaagaagaagaagcccgccgccaacccggccagaggcttcgccacc
acgtccgtcgcatcgtccaagcctcggaccgaacccgccgagggctccgagaccgtcacc
acggccgctctcaacgccgccgtaaaccaggatgcaggcccgccctccgaccctcagtct
acgtctgctggtgccggtgacaaggctaccaagaccgaactgagccccgaggaatttgaa
atgcagctggacgagtccgagctgcagcttttggtagaaaagtacgctcaaaagaccaaa
cgggatgcccaacgccagcggacgaggctagagaccgaccgccgccttctcaggggtcaa
gccgacaccgtcaactcgaggaaatggctgcctcaagagttgatggatcaagtacttgat
ctgatccaagctgagagtcggtttgcatcctccagcgtctctaccgagactgttgctagt
ggaaagctgttgccggaggaggacatgaccatcaagttatggactctgcagcaaacgctc
accagcgttggcttccccgaagagcgcgtgcaggccgtcatgcgtcacatcctcgacatt
gctcccaatataccatcgattgccaaggacagtctttggggccttgaagaagccctcgac
tggatggcccgtgaatgcccaagcgacgagctgcctgactacgaaggcaggggcaaacag
ggaaccaggcaactagacaccccggctgagagtcctctgccctcaggggcaaccaccccc
agggcctctgagcccagtggtcgccaaacgggcggacaaaggtccaagaagaaggccgtc
gtgacttgtgatagtgatattgaaccggatgacctggttccagtcttcctagaaacgaag
gccaagttgtttgtactccaaacgaaccagcagggcaagaagaagcaaaggaatggagac
cctgcagcggaagaagaggcgggaagactggcaaagctccatgcaaaaattgacagaatc
gagaaggatgttttgttcgacaaatttgctgccgagcagcagtggaaaactcaaaagatg
gcgttggagaaggaggctgctgttgcaaggaagcaaaggttgcaagaagaggccgagaag
gagtcagaaaacaagactgaagaagcagccgcatcctccgatggggacatcaacgatgag
gccgagcgtattgctgccgaaattattgcgcagggcgaggatgacgaggatggcggcctc
agtgatcttttcgccaatcttcctgtcacagaggtcgacgctgcaggcaactcaaccacc
gttctgaatggcgcagacggcgtcaagatagccatccgagattttgggaaatggactggc
gtcagccccatgcgagcgttggaggaagcctgccgggcaagagatgctgcggccaagact
acctatcgcctcatttccgaagtaccgttcgctaatcggcatgctgtatccatttcatgg
tccaagtctcaggagataccgccgccgtctcaggatgacagtgttgaagttaccgcctac
ccgtccggcttcaccttcaacatgaagtcggttgccactcccgacaagaaacagtcggaa
gcttatgttgcgacttgggccttgttccacatctttggcacctcgtccaaggaggaaaag
gtcgggatgaggctgcccgttgtctggcgtgagctgtgggatgagctggcagaggctcgc
aaaagccgactggatgccaaggaccgggaagctattagagagctgcgggctctcgtacgc
cagagacaggaccaagagcttgaagacggtgtcatcctccaaagcgcttttaaggggagg
ggcacggcccgcaaccagatcgacaagggagacgaaaccgctcaggaggctgctaagcgg
ctctctggcggacccgagtactaccaaaatatttgggccctgaagaccaatactcccaga
taccaggccatgctccagtctcgcatgcaacttcccatgtggaacttcaagcagcaggtc
acggacgctgtcgacagagaacaagtggtcattatctgcggagagacaggatgtgggaaa
agcacccaggtgccggcctttctactcgagcaccaactggctcaaggcaaggcgtgcaag
atttactgcaccgagccgcggcgaatttcggccatttctttggcccgcagagttagcgag
gagcttggcgagggtcgtaacgacttggggacttcgaggtccctggtgggatactcgatt
cgtctcgaagccaacacctcccgagagacgcggctggtttttgctaccaccggtatcgtt
atgcgaatgctggagggctccaacgacctacgagaagtcacacacttggttctcgacgag
gttcacgagagatccatcgacagcgattttctgctcatcatcctgaagaagcttctgctg
agacgccaggacttaaaggtggtgctcatgtcagccacggttgatgccgagcgattctcc
aattacctcggcggagcaccagtgttgacagtccctggccggacgttccctgttcaagtc
cgctacttggaggatgcaatcgaagcaaccggctacaccgtcggccagaccccccaggag
aagatggtcgatctcgacgacgatgttgtcgaaacgacggaagtcgaagggcccaagtcc
atcgccggggccgacctttcggcctattccgccaagaccagaaacgcattggctcagatg
gatgagtaccggatcgactttgacttgatcgttcagctgattggcaaagtcgcttctgat
tccgagtatgtagcctacagcaaggccatcctcgtcttcctgcccggtatcgccgagatt
cgaacgctcaacgacctcctttccggagacccttcttttgcccgcgactggctcatctac
ccgctccattcgaccattgcgactgaggatcaagaagccgctttccttgttccacctccg
ggcatgcgaaagatcgtgttggcgaccaacatcgcggagacgggcattaccatccctgac
gtgacatgtgtcattgacacgggcaagcatcgcgagatgaggttcgatgagcggagacag
ctctcccgactcatcgacactttcatatcccgcgcaaacgccaagcagcgacgcggaaga
gccggtcgtgttcaggagggactttgcttccacatgttcacgaagcacaggcacgacacg
attatgagcgatcagcagaccccggaaatgctgcgcctttcgctccaggacctggccatc
cgagtcaagatttgcaagattgggggtatcgaggagacactcagcgaggcactagatccc
ccttcggccaagaacatccggcgcgccgtggatgcgcttattgacgttcgtgctctgact
cctgccgaggacctgacccctctcggcaatcagcttgctaggctgcctttggatgtgttc
ctgggcaagctgatcctgatgggcgccatcttcaagtgtttggatatggctattaccgtg
gccgccatcctctcgtccaagtcgcctttcacagcaccgtttgggcagcgtgcacaagcc
gatctcgtacgcaaggggttccgtcggggcgactcggatttgttgacagtgtataacgcg
tatctcgcgtggaaacgggtgtgccagtctaccagcgcttctggcgggaaggacttccaa
ttttgccggaagaactttctcagccagcagacactggccaacatagaagacctcaagggc
cagctcctggtttcggtggcggactccgggttcctcttgctgactgacgacgagagacga
gccctcaatcggttgcggtatggcgccaactcgagagggagacggcatcagaacttcttc
gacatcccccaacgcgtgagcatcaacagtgagaacgacgccatcacaacggcagtcgtc
gcgtggagcttctaccccaagttgctggttcgtgacaacccgggaagccggggcttgcgc
aatgtcggcaacaaccagtccattaccctgcatccatcctccgtcaacaagggccataat
gagctgaaatggctgtcctactatcacatcatgcagtccaagagtgtttaccacgcacac
gagactacggctgccgatccttttgccattgctctgctgtgcggcgacgtacgagctgac
atgtttgctggtgttctcgtcctcgatggcaaccgctgcaggtttgccgtacccgactgg
aagacaatgcttgtcatcaaggtcctccgcaccaggctcagagagctcctcactcgctcc
ttcaagcaaccgggcaagttgccgacggcacagcatgagcggtggttggcgatttggcaa
aagattttctcgcaagaaacgaataaggaaaacgggaccacagccgtcagcaaggcatag
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integrated database retrieval system
