Colletotrichum higginsianum: CH63R_09971
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Entry
CH63R_09971 CDS
T08176
Name
(RefSeq) DNA lyase
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_09971
Enzymes [BR:
chig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CH63R_09971
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CH63R_09971
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
28869052
NCBI-ProteinID:
XP_018154369
UniProt:
A0A1B7Y1G2
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Position
7
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AA seq
577 aa
AA seq
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MFEILEADIVIMQETKIQRKDLGDDMVLVPGWDVFFSLPKYKKGYSGVAIYTRNATCCPI
RAEEGITGILTPPNSSTSFRELPEAQQIGGYPRPGQLPGEVDEATLDSEGRCVILEFPAF
VLIGTYSPATRDSSRDSFRLGYLNALDARVRNLVAAGKQVILAGDLNVTRNEIDTCNVRE
ALRKEGMSVEEWMGSPSRRLFNHLVFDGQVAGHRDEGRETPVLYDLTRVFHPTRQDMFTC
WDTKRNMRPANNGSRIDYILCSAGIKGWFTDSNIQEGLMGSDHCPVYAVLGDTVKANDKD
ASVLDLMNPKGMFWDGKRLREWSAKDLLPLSAKLIPEFDRRRNIRDMFMKKPVAKTSPSQ
TPNSFESQSIMSNEPPTLQEQDEPEVYQQDTPEPSASQASVQSNPGIPSLVLMNAKPASS
QPNSPVKRPLETTAPTRRPAKKTKTNEADSSKQSTLTGFFKPKQPSSKPTPAKPDATETI
QSSPMNNKSGVVAAASNVLAPPAPSPSSSASTSSSAAATASALDALERVFDPIEAKESWS
KFNLGKRVVPRSGEKEKGTEWRCGTFIWSSDWKKEQS
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatcttggaggcagacattgtgattatgcaggagacaaagatacagcgcaaa
gaccttggcgatgacatggttctcgtccccggctgggatgtcttcttcagtctcccgaaa
tacaagaaagggtattctggcgttgcgatttacactcgcaatgccacgtgctgtccaatc
cgcgccgaggagggtatcacaggcattctcacacctcccaactcatccaccagcttccgc
gagctgcctgaggctcaacagatcggcggctacccacgaccgggccagctgccaggcgag
gtggacgaggcgacgctcgactccgagggacgatgcgtcatcctcgagttcccagccttt
gtcctgatcggcacctacagccccgccacgcgtgattcgtcgcgtgactcgttccgatta
gggtatctcaacgccctcgacgcgcgggtgcggaacctcgtggcggcagggaagcaagtc
atcctggcgggggacctgaatgtgactcgtaacgagattgatacgtgtaatgtcagggag
gcactgcgcaaggagggcatgtcggtggaggagtggatggggtccccgagtcgacgattg
ttcaaccatctggtctttgacgggcaggttgccggccacagggacgaaggaagagaaacg
ccagtgctatacgacttgacgcgggtctttcatcccacacgacaggacatgtttacctgc
tgggacacgaaaagaaacatgcggccggccaacaacggtagtcgaatcgactacatcctc
tgttccgccggtatcaagggctggttcacagactccaacattcaggagggcctgatggga
tcggatcactgtcccgtatacgcagtccttggcgacacggtcaaagccaacgataaagat
gcatctgtgctggacctcatgaaccccaaaggcatgttttgggacggcaagcggctcaga
gagtggtcagccaaagacctgctccccttgtcagccaagctcatccctgagttcgatcgc
aggcggaacatccgcgatatgttcatgaaaaagcccgtcgcaaaaacctcaccaagccag
actccgaattcttttgagtcgcagagtatcatgtccaacgagccacccacacttcaagaa
caagacgagccagaggtctaccaacaagatactccagaaccatcagcttcccaagcatcc
gtccagtccaaccctggcattccgtcactcgtccttatgaatgcaaaaccagcgtcctcg
caaccgaattctcccgtaaaacgaccactagaaacgacggcgccaacgagacgtcccgca
aagaagacaaaaaccaacgaagccgattcttccaagcagagcaccctcacaggcttcttc
aaacccaagcaaccgtcctcaaaaccgactcccgccaagcccgacgcgacggagacaatt
cagtcatcgcccatgaataacaaaagcggcgttgtagctgcagcgtcaaacgtcctggcg
ccaccggccccttccccgtcgtcctcggcgtcgacgtcctcttccgccgccgccacggca
tctgcgcttgacgccttggaaagggtgtttgaccccatcgaggccaaggagtcttggtcc
aagtttaacctggggaagagggttgtgcctaggtcgggagaaaaagagaaggggacggag
tggaggtgcggaaccttcatctggagcagcgactggaagaaagagcagtcttag
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