Colletotrichum higginsianum: CH63R_10234
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Entry
CH63R_10234 CDS
T08176
Name
(RefSeq) Replication factor RFC1 C terminal domain-containing protein
KO
K10754
replication factor C subunit 1
Organism
chig
Colletotrichum higginsianum
Pathway
chig03030
DNA replication
chig03410
Base excision repair
chig03420
Nucleotide excision repair
chig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH63R_10234
03410 Base excision repair
CH63R_10234
03420 Nucleotide excision repair
CH63R_10234
03430 Mismatch repair
CH63R_10234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chig03032
]
CH63R_10234
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_10234
DNA replication proteins [BR:
chig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CH63R_10234
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CH63R_10234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_18
AAA_16
AAA_28
RuvB_N
AAA_14
AAA_24
BRCT_2
Hda_lid
Motif
Other DBs
NCBI-GeneID:
28869315
NCBI-ProteinID:
XP_018154632
UniProt:
H1VIC1
LinkDB
All DBs
Position
7
Genome browser
AA seq
1039 aa
AA seq
DB search
MPDIRSFFGPKGGAAPKPPAKKVEEPVKGRRNRKVVEDSDDDDEPVPAPKPAVKAADKKK
TKAEAVNGTETTASDYFSKPAKASRSAPATKADQTTKVKNEVEIRTSPRNKKTTAKPAEP
AQNGSAAIKKRGTTTYTKLESDDDADAYKDDGDEEDDDIFAADVKGRNKRKNDDYAEDES
EDDLLPKPKRVASRSAVAATPIKSTRATAGAKRRKTPEDDEEESEEDQPPKKKAPAKPRA
PRAKKADEPEDSAYQSILNDIPTVRPPTPPAKDPDAKFDWRKNAGSGGNSSAVPPNAGSV
ELPEGEEECLSGLTFVFTGVLQTIGREEGQTLVKKYGGKVTGAPSSKTSYVVLGDDAGPS
KLKKIRDMKIKTINEEGLFELIRRLPAYGGSGKGAEKAREKKKKDEEAIKRQALEMEQEE
KARKAAAEKAAKQAAAARGTAAPTTPTAAPVQLWTSKYAPTQINHICGNKAQVEKIQAWL
ENWHKAKKYDFQRRGADGMGATRSIIISGPPGIGKTTSAHLAAKLAGFDVIESNASDTRS
KKLVENGVSDVMNNTSLLGFFAGDGKKVDGGKKNIVLIMDEVDGMSAGDRGGVGALAKFC
KKTEIPLILICNERKLPKMKPFDFVAMDVPFRRPTVEQVRSRIMTICHREGLKLPVQVID
ALIEGSNKDIRQIINMISTAKLDQASMDFDKGKAMSKAWEKHVILKPWDICQKMLGGGLF
APASKTTLNEKIELYFNDHEFSYLMIQENYLRTKPMALNNRGYNKREENLKYLELVDQAA
ESISDGDLVDRMIHGPQQQWSLMPTHAIFSTVRPSSFVAGQLMGSNFTSWLGNNSKTGKL
GRYVRELHSHMRLRSSGDANEIRQQYLPVLWDQTVRRLSVEGKDSVDEIIALMDSYYLTR
DDFDAIQELGVGPQAEGRADIESKTKAAFTRTYNAMSHPIPFMKASNVMEPKKAAKQAPD
LEEAIEEDDDVDVAEPAEPAEDDQLDLKGDKYIKQPKPKAKRATKKAKADDEDGDDAGVK
PKKGRPSGKATAAKGKGKK
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacattcggtccttttttgggccaaagggaggtgcagcccccaagcctccagcg
aagaaggtcgaggagcctgtcaagggtcgaagaaacaggaaagtcgttgaggacagtgac
gacgacgatgaacctgttcctgcaccgaagccggcagtgaaagctgctgacaagaagaag
accaaagccgaggctgtaaatggaaccgagactacagccagcgattacttttcgaagcct
gctaaggcttccagatctgcacccgctacaaaagcagaccaaaccaccaaagtgaaaaac
gaggttgagattcggactagcccacgcaacaagaagacgactgcgaaaccggcagaaccc
gcccagaacgggagtgcggcgatcaaaaagcgaggtaccacaacgtatacaaagctcgag
tcggacgacgacgccgatgcctacaaagatgatggtgacgaggaggacgacgacatattc
gctgccgatgtcaaaggccgaaacaagcggaagaacgacgactatgccgaggatgaaagt
gaagacgatctgttaccaaagccgaaacgcgtggcttcccgaagtgctgtcgccgcgacc
ccaatcaagagcaccagagcgacggcgggtgcgaagagacgcaagacccccgaagacgat
gaagaggagtccgaggaggatcagccaccgaaaaagaaggcccctgccaagccacgtgct
ccccgagccaagaaggcagatgaacccgaagattcggcgtaccaatcgattctgaatgac
atccctaccgttcggccccctacacctcctgccaaggatccggacgcaaagttcgactgg
aggaagaacgctggctctggcggaaatagcagtgcagtgcctccgaatgccggctctgtc
gaattgcccgagggcgaggaggagtgtctttcgggactgacctttgtgttcactggtgtt
cttcaaaccatcggccgcgaggagggccagacgctggtcaagaaatatggcggcaaagtc
accggagcacccagcagcaagaccagttatgttgttcttggagacgacgcaggccccagc
aagttgaagaagatcagagacatgaaaatcaaaaccatcaacgaggaaggcctgttcgaa
ctcattagacgactgcccgcctacggcggtagcggcaaaggtgcggagaaggctcgagag
aagaagaagaaggacgaagaagccatcaagaggcaagctctggaaatggagcaagaagag
aaggccagaaaggccgcagcagagaaggcggccaagcaagcagcggctgcgcgcgggacc
gccgcaccaacgactccgaccgcggccccagtgcagctctggacctccaagtatgcacca
acccaaatcaaccacatttgtggcaacaaggcgcaggtcgagaaaattcaggcctggctc
gaaaattggcacaaggcaaagaagtacgattttcagaggcgtggggcggacggtatgggc
gccacgcgatccatcatcatctcaggccccccaggtatcggcaagacgacttcagcccac
ctggcggccaaactggctggattcgatgtcatcgagagcaacgccagtgacacccgcagc
aagaaacttgtcgaaaatggtgtcagtgatgtcatgaataacacgtcgcttctcggcttc
ttcgccggagacggcaagaaggtcgatgggggaaagaaaaacatcgttctgatcatggat
gaagtcgatggaatgtcagcaggagatcgtggcggtgttggtgccctagccaaattctgc
aagaagaccgagatacccctcattctcatctgcaatgagcgtaagctgccaaagatgaag
cctttcgactttgtggctatggatgttcccttccgacgaccaacggtagagcaggtccga
tcccgcatcatgaccatctgccaccgcgaagggctgaagctccctgtccaagtcattgat
gctctgattgagggcagcaacaaggacatccgccagatcatcaacatgatctccaccgcc
aagctcgaccaagcatctatggatttcgacaaaggcaaggccatgtcgaaggcatgggag
aagcacgtcattctcaagccatgggacatctgccagaagatgctgggtggcggattgttc
gctccagcaagcaagactaccctgaacgaaaagatcgagctctatttcaacgaccacgag
ttcagttacctcatgatccaggagaactatctcaggacgaagccaatggcactcaacaac
agaggttacaacaagcgggaagagaacctcaaatacctcgaacttgtggaccaggcggcc
gagagtatcagcgatggcgacctggtcgaccgtatgattcacgggcctcagcagcaatgg
agtctgatgcccacacacgcaatcttcagtacagttcggccctcaagcttcgtggctggc
cagctcatgggttccaacttcacttcctggctcggcaacaatagcaagactggcaagctc
ggtcgatatgtccgtgagctgcattctcacatgagactccggtcttcaggcgatgccaac
gagatccgccagcaatacttgcctgtactctgggaccagacggtccgccgcttgtctgtc
gaaggcaaggattccgttgacgaaatcatcgcgctgatggatagctactatctgacacgg
gacgacttcgacgcgattcaagagcttggtgttggtcctcaagctgagggtcgcgctgac
attgagtcgaagacgaaggcggcattcactcgaacttacaacgccatgtctcatcccatt
cccttcatgaaggccagcaatgttatggagccgaagaaggccgcgaagcaggctcccgac
cttgaagaagcgattgaagaagacgacgatgtcgatgttgctgagcctgctgagcctgct
gaagatgaccagctcgacttgaagggggataagtacatcaagcagccgaagcccaaggcc
aagagggccactaagaaagccaaagcggatgacgaggatggtgacgatgcaggtgtcaag
cctaagaagggccggcccagtggcaaggcaacagctgctaaaggcaagggcaagaagtga
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