Colletotrichum higginsianum: CH63R_10236
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Entry
CH63R_10236 CDS
T08176
Name
(RefSeq) Replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
chig
Colletotrichum higginsianum
Pathway
chig03030
DNA replication
chig03410
Base excision repair
chig03420
Nucleotide excision repair
chig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CH63R_10236
03410 Base excision repair
CH63R_10236
03420 Nucleotide excision repair
CH63R_10236
03430 Mismatch repair
CH63R_10236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chig03032
]
CH63R_10236
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_10236
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_10236
DNA replication proteins [BR:
chig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CH63R_10236
DNA Replication Termination Factors
ELG1-RFC complex
CH63R_10236
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CH63R_10236
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CH63R_10236
Check point factors
HRAD17(Rad24)-RFC complex
CH63R_10236
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA
AAA_16
MTC2_N
Rad17
Rep_fac_C
AAA_24
ATPase_2
SLFN-g3_helicase
ABC_tran
nSTAND6
DUF7804
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
28869317
NCBI-ProteinID:
XP_018154634
UniProt:
H1VIB9
LinkDB
All DBs
Position
7
Genome browser
AA seq
352 aa
AA seq
DB search
MALIVDKHRPKSLEALSYHQDLSDRLSSLAQSGDFPHLLVYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTSSNRKLEFNIVASNYHLEITPSDVGNYDRVVIQDLLKEVAQTQQ
VDQSAKQKFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTL
LVRVAAPTHEQICDVLAVSAKKENWPMVKGLHMRIAQESGRNLRRALLMYEAVHAQNEKV
TDTTPIPPPDWEALISQIAREIIDEHTPARILQVRAKLYDLLTHCIPATTILKTLTFKLI
PLIDDALKAEVIKWSAFYEHRIRMGTKVIFHLEAFVAKFMRIMEMYLMSMDL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcattgtcgacaaacacagaccgaagtcactggaggctctgtcgtaccatcaa
gacctgtcagataggcttagctctcttgcgcaaagcggagatttcccccatctgctggtg
tacggcccgtctggcgctggcaagaagacacgcattgtcgccactctcaaggagctatac
ggacccggcgtagagaagatcaagatcgatgctcgtgtcttccagacgtctagcaaccgc
aagctcgagttcaacattgtcgcgtcgaattatcacctcgagatcacaccatcggacgtc
ggaaactatgaccgagttgtcatccaggacctgctgaaagaggtggcacaaacacaacaa
gttgaccagtcggcgaagcagaagttcaaggtcgtggtcatcaatgaggccgaccacctc
acgagagacgcgcaggcggcgctgcgtcggacaatggagaagtactctccaaacttgcgg
ctgatcctcctcgccaattcgacggccaacattattgcccccatccgatcgagaacgcta
ctcgtcagagtggctgcaccaacacacgagcagatctgtgatgtcctggcagtgtcagcg
aagaaagagaactggcccatggtcaagggcctgcacatgaggatagcgcaagagagcggc
aggaatctgcgccgagctttgctcatgtacgaggccgtccacgcacaaaacgagaaagtg
acggataccacaccgattcccccaccagactgggaagctctgatcagccagatcgcgagg
gagatcatcgacgaacacacccctgctcggattcttcaagtgcgagcaaagctttacgac
ctcctgacgcattgcataccggcgacgacgattctcaagaccctcaccttcaagctcatc
ccgctgatagacgacgcactgaaggccgaagtgatcaagtggtcggcgttctacgaacac
cgaatcaggatgggcacaaaggtcatcttccatctggaagcattcgtggccaagttcatg
aggatcatggaaatgtacttgatgagcatggatttgtga
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