KEGG   Colletotrichum higginsianum: CH63R_10318
Entry
CH63R_10318       CDS       T08176                                 
Name
(RefSeq) helicase associated domain-containing protein
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
Organism
chig  Colletotrichum higginsianum
Pathway
chig03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CH63R_10318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:chig03041]
    CH63R_10318
   03009 Ribosome biogenesis [BR:chig03009]
    CH63R_10318
Enzymes [BR:chig01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CH63R_10318
Spliceosome [BR:chig03041]
 Complex A
  U2 snRNP components
   U2 related factors
    CH63R_10318
 Complex B
    CH63R_10318
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    CH63R_10318
Ribosome biogenesis [BR:chig03009]
 Eukaryotic type
  90S particles
   Helicases
    CH63R_10318
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C DEAD HA2_C AAA_22 HA2_N SRP54 AAA_19 Cas3-like_C_2 Flavi_DEAD GNAT-phage-like NB-ARC AAA_23
Other DBs
NCBI-GeneID: 28869399
NCBI-ProteinID: XP_018154716
UniProt: A0A1B7Y2E9
LinkDB
Position
7
AA seq 773 aa
MADADPKGFKRSSADRDGSLRKKAKKEEEADSEESKYNPYLAHMKEENGVKAEDGVIDAS
SPFAGFKPRATTAKQAEKVEDLDTNAFTGRPHSQKYFQIMQSRRDLPVQKQRQEFLDKYH
STQILVFVGETGSGKTTQIPQYVVYDELPQLNRKMIACTQPRRVAAMSVAQRVADEMDVE
LGEEVGYSIRFEDRTGPNTILKYMTDGMLLREAIHDHEMSRYSCIILDEAHERTLATDIL
MALLKQIAARRPDLKIIVMSATLDAQKFQRYFNDAPLLAVPGRTHPVEIFYTPEPERDYV
EAAIRTVLQIHASEGEGDVLLFLTGEEEIEDACRKINLEADEMTREIDAGPLAVYPLYGT
LPPHQQQKIFDKPPAPYKKGGRPGRKVIVATNIAETSLTIDGIVYVVDPGFSKQKIYNPR
IRVESLLVSPISKASAQQRAGRAGRTKPGKCFRLYTENAFKKELIEQTHPEILRSNLANT
VLELKKLGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGSLASEFPLDPA
LAVMLISSPEFYCSNEILSITSLLSIPQIWVRPAAQRKRADEMKAQFSHPEGDHLTLLNA
YHAFKGTASQPGVDPKKWCHEHFLSFRHLSSADNVRAQLKRIMETHGLELISTPFEDKNY
YTNIRRALLSGFFMQVAMKESSGKVYRTIKDDQAVMMHPSTVLKTDYEWVLYNEFVLTSK
QYIRTCTGIRPEWLMEIAPVYYDLDSFEKGDVKTALTRAAEKKRRKEAMKNGR
NT seq 2322 nt   +upstreamnt  +downstreamnt
atggccgacgccgatcccaagggcttcaagcgttccagcgccgacagagacgggagcttg
aggaagaaggccaagaaggaggaggaggcagactcggaagagtccaagtacaacccctac
cttgcacacatgaaggaggaaaatggcgtcaaggccgaggacggtgtcatcgatgccagc
tcgccctttgccggtttcaagccgcgcgcgaccacggccaagcaggccgagaaggtcgaa
gacctcgacaccaacgccttcaccggccggccccattcgcaaaagtacttccagattatg
cagtcgcgccgcgatctgcccgtacagaagcaaagacaagagttcctcgacaagtaccac
tccacccagatcctcgtcttcgttggtgagacgggttccggaaagacgacccagatcccc
caatatgtcgtctacgacgaactcccccagctcaaccgcaagatgatcgcctgtacccag
ccccgtcgtgtcgccgccatgtccgtcgcccagcgtgtcgccgatgagatggacgtcgag
ctcggcgaggaggtcggatacagcatccgttttgaggacaggacaggccccaacacaatc
ctgaagtacatgacggacggtatgcttctccgagaagccatccacgaccacgagatgtcg
cgctacagctgcatcattcttgacgaggcccacgagcgcactcttgccaccgatatcctc
atggccctgctcaagcagatcgccgcccgccgccccgacctcaagatcattgtcatgtcc
gccacgctcgatgcgcaaaagttccagcgctacttcaacgacgcgcccctcctcgccgtc
cccggtcgtacgcatcccgtcgagatcttctacacgcccgagcccgagcgagactacgtc
gaggcggccatcaggacggtgctgcagatccacgcctccgagggcgagggcgacgtcctc
ctcttcctgacgggtgaggaggagattgaggacgcgtgcaggaaaatcaacctagaggcc
gacgagatgacaagggaaatcgacgccggtccgctagccgtctacccgctgtacggcacg
ctgccgccgcaccagcagcaaaagattttcgacaagcccccggccccttacaagaagggc
ggccggcccggtcgcaaggtcatcgtggcgaccaacattgccgagacgtcgctgacgatc
gacggtatcgtctacgtcgtcgaccccggcttcagcaagcagaagatctacaacccccgc
atccgtgtcgagtcgctcctggtgtcgcccatctccaaggcctcggcccagcagcgtgcc
ggtcgtgccggtcgtacaaagcccggaaagtgcttccgtctgtacacggaaaatgccttc
aagaaggagctcatcgagcagacgcaccccgagatcctgcggtccaacctcgccaacacg
gtgctggagctgaagaagctcggcgtcgaggacctcgtccacttcgatctcatggacccc
ccggcccccgagaccatgatgcgcgcgctcgaggagctcaactacctcgcctgcctcgac
gacgatggtgagctgacgacgctcggtagcctggcgtccgagttccccctcgacccggcc
ctggccgtcatgctcatctcgtcgcccgagttctactgctccaacgagattctctccatc
acgtcgctcctgtccatcccccagatctgggtccgcccggcggcgcagcgcaagcgcgcc
gacgagatgaaggcgcagttctcccatcccgagggcgaccacctcacgctcctcaacgcc
taccacgccttcaagggcacggccagccagcccggcgtggaccccaagaagtggtgccac
gagcactttttgtcgttccgccacctcagcagcgccgacaacgtccgcgcccagctgaag
cgcatcatggagacgcacggcctcgagctcatctcgacgccctttgaggacaagaactac
tacacaaacatccgccgcgccctcctctcgggtttcttcatgcaggtcgccatgaaggag
agctccggcaaggtgtaccggaccatcaaggacgaccaggccgtcatgatgcacccgtca
acggtgctcaagacggactacgagtgggtgctctacaatgagttcgtcctgacctcgaag
cagtacatccgtacctgcaccggaatcaggccagaatggctgatggaaatcgctccggtc
tactacgaccttgactctttcgagaagggcgatgtcaagacggccctcacgcgggccgcc
gagaagaagcgccgcaaggaggccatgaagaacggccggtga

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