Colletotrichum higginsianum: CH63R_10571
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Entry
CH63R_10571 CDS
T08176
Name
(RefSeq) Pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_10571
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CH63R_10571
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
28869652
NCBI-ProteinID:
XP_018154969
UniProt:
H1V3Q4
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Position
7
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AA seq
331 aa
AA seq
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MKFSGFASWALLAAAVSAIPTSIVEEGHLLNKRAAITDAANIGYATQNGGTKGGVGGTTT
TVTNLAQLSAAANASGPGIVIIQGNIVGKAKVQVGSDKTIVGKTGSSLEGIGLTILGQKN
VIIRNVKISKVEAAYGDAITIQLSKNVWVDHCDLSATRDGDKDFYDGLTDLSHAADWVTI
SHTYFHDHSKGSLVGHSDNNAAEDTGTLRVTYANNHFFNVRSRGPLLRFGTAHVYNQYYN
TMDTGLNTRMGAQALIQSSVFENVGKKAIFSESSKETGYAVAIDVVLGGQSANTAPVGKL
TASSPPYSYSLLGSANVKAAVTKEAGQTLGF
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctccggtttcgcgtcttgggccttgctggcggccgctgtctcggccattccc
acctccattgtcgaggagggccacctcttgaacaaaagagcagccatcacggatgccgcc
aacataggctacgcgacccagaacggcggaaccaagggcggtgttggcggtaccactacg
accgtcacgaatctcgctcagttgtctgctgctgccaacgcgtccggccctggaatcgtc
atcatccagggcaacattgtcggcaaggccaaggtgcaggttggttctgacaagaccatt
gtcgggaaaacaggcagctcgcttgaaggcatcggcctcaccatcttgggacaaaagaac
gtcatcatccgtaacgtcaagatcagcaaggtcgaggcggcctacggcgatgccatcacc
atccagctgtccaagaacgtctgggtcgaccactgtgacctgtccgccacccgcgacggc
gacaaggacttctacgacggcctgaccgacctctcccacgccgccgactgggtcaccatc
tcccacacctacttccacgaccactccaaaggctccctcgtcggccactcggacaacaac
gcagccgaggacacgggcaccctgcgcgtcacttatgccaacaaccacttcttcaacgtc
cgcagccgcggcccgctgctgcgcttcggcaccgcccacgtctacaaccagtactacaac
accatggacactggtctgaacacccgcatgggcgcccaggctctcatccagagctccgtc
tttgagaatgtcggcaagaaggctatcttcagcgagtcgagcaaggagaccggttacgcc
gttgccatcgatgttgttctcggcggccagagcgcgaacaccgcgcccgtaggcaagctc
acggccagcagccccccttacagctactcccttttgggatctgccaacgtcaaggcggcg
gtgacaaaggaggcgggacaaacgcttgggttctga
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