Colletotrichum higginsianum: CH63R_10760
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Entry
CH63R_10760 CDS
T08176
Name
(RefSeq) TRAF-type zinc finger
Organism
chig
Colletotrichum higginsianum
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-TRAF
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-TRAF_2
Sina_ZnF
zf-C3HC4_4
zf-rbx1
Prok-RING_4
TPD52
FapA
U-box
zf-RING_6
zf_UBZ
DivIC
Motif
Other DBs
NCBI-GeneID:
28869841
NCBI-ProteinID:
XP_018155158
UniProt:
A0A1B7Y3P0
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Position
7
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AA seq
483 aa
AA seq
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MSHPGFPGDGSATTHLVHNLVEEAVRSLEGVPIPLTREYHPGPKEKREPIVEHPANRIVG
NPARTPPNQWPVEEISTREALRHSISPSKVRELLDFSALLYADEPDDNLLCPICKLPVIT
PIITPCDHTFCLECLKRHFRSSDTCPIDRTRFRARDCKTSRLLTNILDSLVVECPNTERG
CSEKMKREEVVKHTINCRYTLHDCPDKACDKRVQQWLAVSGKCWHFEQTCEYCEDKMEAA
SMADHINKKCTKNTTSCSDCGVTIKLSEVSQHRDGSCPEASVACKYVDYGCTHEALRKIL
GAHQDDCIYKVVAVVGDKVKAQEKQIEKLQKQTEDQERQIMELKEERRDCISWDDVFSLN
NVQGGPKFKPTEAVMTIYEDMERRMEELKKELTDLEGRQTVMVLNQVMPIKDQITEIRSN
LGILKMHMAWLMNKSREEVERSRLANRSVSSTSRTRGSSDSDGEAGPSTSRRLSDGSNGI
PRL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatcctggctttcctggcgacggctctgccactacccatctcgtccacaacctc
gttgaagaggctgtgcggtcgctcgagggagtccccatccctctgacgcgtgagtatcac
cccggacctaaagagaaacgagagcccatcgttgagcacccagctaatcgtatcgttggc
aacccagcacgaactcctcccaaccagtggccggtcgaagaaatatctactcgggaagcg
ttgcgacactccatcagccccagcaaagtcagggaattgctcgacttctccgccttgctg
tacgccgacgagcccgacgataaccttctctgtcccatctgcaagcttcccgtcattacc
cccataatcacgccctgcgaccataccttctgtctcgaatgcctcaagcgccatttccgt
tcatccgatacatgccccatcgaccgcaccaggtttcgcgccagggactgcaagacgtcg
agactcttgaccaacattctcgatagcctggttgtcgagtgccccaacactgagcgagga
tgtagcgaaaagatgaagcgcgaggaggttgttaagcacaccatcaactgcaggtacacg
ctgcacgactgtcccgacaaggcctgcgacaagagggtgcagcagtggcttgcagtctcg
ggcaagtgctggcatttcgagcagacatgcgaatactgcgaagacaagatggaggcggcg
tccatggcggaccacatcaataagaagtgtaccaaaaatacaacgagctgctccgactgc
ggcgtgacgatcaagctctccgaagtcagccaacaccgcgatggcagctgtcccgaggcg
tcggttgcctgcaaatatgtcgactacggctgcacacacgaggcgcttcgcaagatcctg
ggcgcccaccaagacgactgcatctacaaggttgtcgccgtcgtgggcgacaaggtcaaa
gcccaagagaaacagatcgagaagctgcagaagcagactgaagaccaggagaggcagatc
atggaattgaaggaggagcggcgcgattgcatctcgtgggacgatgtcttcagcctcaac
aacgtccaaggcggtccaaagtttaaacccacagaggccgtcatgaccatatacgaagac
atggaacgccgcatggaggagctcaagaaggagctgaccgacttggaagggcgccagacg
gtcatggtcctgaaccaggtcatgccgatcaaggaccagatcaccgagatcaggagcaac
ctgggcatattaaagatgcacatggcctggcttatgaacaagagccgcgaggaagtcgag
cgcagccgtctggccaatcgtagtgtcagcagcaccagccgcacgcgcggcagctccgac
agcgatggcgaagccggcccgtcaacgtctcgaagactgagcgacggatcgaacggcatt
cctcggctttga
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