Colletotrichum higginsianum: CH63R_10816
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Entry
CH63R_10816 CDS
T08176
Name
(RefSeq) Sda1 domain protein
KO
K14856
protein SDA1
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_10816
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CH63R_10816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
CSD2
Motif
Other DBs
NCBI-GeneID:
28869897
NCBI-ProteinID:
XP_018155214
UniProt:
H1VA14
LinkDB
All DBs
Position
7
Genome browser
AA seq
744 aa
AA seq
DB search
MGKRKVTALEKVDIDFASLQYKIRRDPKSYEENFLQQWGQYESQREVFLVSPTTATREYI
ESFHNLVDLLAHTVDLYPKHAVAFPDDLKAILLQHHEVLHPELREKIVGSLALLRKKEVI
DSTTFLTTLFPILVSSPSKTLRTLLFQKILTEMRNANSKATNHPLNRTIQTVLYNLITAD
RTSPKAIWAVKLTRELWKRQIWTDAKTVDVMKEAALSDNEKVVIGAVRFFLGGDKEREEL
EDDSSDEEEIDLNKMKHQIGINKKSKKQANAYKKAVAKIHKQERGKAKPHPLNFSAFHLL
HDPQGFAENVFQKHLQNTKTKLAHENKLLVLQLVTRLVGLHQLTIISLYSWFIKFLTPRQ
ESVTSYLASLAQGTHSLVPPDAVEPLIQKIANEFVSEAAASEVAAAGLNAIREICARQPL
AMTDTLLQDLVQYRKSKDKGTMMAAKGLLSLYREVGADLLVKRDRGKDASMGLRSGEIKT
KRFGEQAVGGIEGIELLAKWKEEQRKLKRAAKGLPEDGSDKEDEEEDGYKSEDWEVDSDD
SDDSGGWINVEHSEDEDDEPAPKKRRTGEDGSDSEEDEDEEDSAAEIERIQKLATTTILT
PADLQKLQELRMEASLNKTLGNRSSKRQKEIEKALARHADDGLTAEQIEAPARLRKTTKE
ERVAMAKEGKPGRDEHKSTQAIRRSKKDAEGKSTTNKEKARQKNFLMTLNKAKFKNKRSL
VQTRKVLQGHIDRSKRGGRRANGM
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcgcaaggtcaccgcccttgagaaggtcgatatcgacttcgcgagtctgcag
tacaaaatccgccgggaccccaagtcctacgaggagaacttcctccagcaatggggccag
tacgagagccagcgcgaggtcttcctcgtctcgccgacgaccgcgacgagggaatacatc
gagtcgttccataacctggtcgatctcctcgcgcacaccgtggacctgtacccgaagcac
gccgtcgcgttccccgacgacctgaaggcgatcctgctgcagcaccacgaggtgttgcac
cccgagctccgcgagaagattgtcggaagtctggcgctgctgcgcaagaaggaagtcatc
gactcaacgacctttctgacgacgctgttcccgatccttgtttcctcgccgagcaagact
ctgcggacactcctcttccagaagatccttaccgagatgcgcaacgcgaactccaaggcg
acaaaccaccccctcaaccgcacaattcagaccgtcctctacaacctgatcacggccgat
cgcacttcgccaaaggccatctgggccgtgaagctcacccgcgagctgtggaagcgccag
atctggaccgacgcgaagaccgtcgacgtcatgaaggaggcggccctctccgacaacgaa
aaggtcgtcatcggcgccgtgcggttcttcctcggcggagacaaggagcgcgaggagctg
gaagacgacagcagcgacgaggaggagattgacctgaacaagatgaagcatcagatcggc
atcaacaagaagtccaagaagcaggcgaatgcctacaagaaggccgtcgccaagatccac
aagcaggagcgtggcaaggcgaagcctcacccgctcaacttctccgccttccacctgttg
cacgacccgcagggcttcgccgagaacgtcttccagaagcacctgcagaacaccaagacg
aagctggcgcacgagaacaaactgcttgtcctgcagctggtgacgagactggtcggtctc
caccagctcaccatcatcagcctgtactcgtggttcatcaagttcctcacaccccgccaa
gagtccgtcacctcctacctggcctcgctggcccagggaacgcatagcctggtgcccccg
gatgcggtcgagccgctcatccagaagattgccaacgagtttgtctcagaagccgccgcc
tccgaagtagccgccgccggtcttaacgccatccgcgaaatctgcgcaagacagcccctg
gcgatgaccgacacgctgctgcaggatcttgtccagtaccgcaagagcaaggacaaggga
actatgatggctgccaagggtcttttgtcgctctacagggaagtcggcgcggacttgctg
gtgaagagggacagaggcaaggacgcatccatgggcttgaggagcggcgagatcaagacg
aagaggttcggagagcaagcggtcggaggcatcgagggcatcgaactgctggccaagtgg
aaggaggagcagcgcaagctcaagcgcgccgccaagggtctccccgaggacggctccgac
aaggaagacgaggaggaagatggctacaagtccgaagactgggaagtcgactcggacgac
agcgacgactctggcggctggatcaacgtcgagcactcggaagatgaggatgacgagccc
gcgccgaagaagcgcaggacaggagaggacggatccgactcggaggaggacgaggacgaa
gaggactccgcagccgagatcgagaggatacaaaagctcgcgacgacgacgattcttacg
ccggccgacctccagaagctccaggagctgcgcatggaagccagtctgaacaagacgctg
ggcaaccgctcgtcgaagcgtcaaaaggagatcgagaaggctctggcgcgccacgccgac
gacggcctcacggcggagcagatcgaggcgccggccaggctgcgcaagacgaccaaggag
gagagggtggcgatggccaaggagggcaagccgggccgcgacgagcacaagtcgacgcag
gccatccgccggtccaagaaggacgccgagggcaagagcacgaccaacaaggagaaggcc
cgccagaagaacttcttgatgacgctgaacaaggccaagttcaagaacaagaggagtctg
gtgcagacgcgcaaggtgctgcagggccacatcgacaggagcaaacgcggcggaagacgc
gccaacggcatgtaa
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