Colletotrichum higginsianum: CH63R_11259
Help
Entry
CH63R_11259 CDS
T08176
Name
(RefSeq) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_11259
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CH63R_11259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
MF_alpha_N
Motif
Other DBs
NCBI-GeneID:
28870340
NCBI-ProteinID:
XP_018153074
UniProt:
H1UY72
LinkDB
All DBs
Position
8:795311..796611
Genome browser
AA seq
332 aa
AA seq
DB search
MKITSALATLFALAAATPTPTVDNVADKAHLVKRASVSDKATIGYATLNGGTSGGSGGTV
TTVSSLAEFTAAVNEKDTTPRVVVVKGIIKGTANVRIGSNKSVIGLPGGGFEGIGLHVRR
QSNVIIRNIKSSFVLASTGDGVKIEQSTNVWIDHSEFSSALVADKDYYDGQVDASHGADY
ITISYTYFHDHWKTSLIGHSENNGAVDSGHLRITYANNYWANFGSRGPSLRFGTGHIYNS
YYLNGNSAINTRQNAQVLVQSTVFKNVTVPITSQDSDIVGYAVSIGNDLGGAANLAPVGT
LNANSPPYSYTLLGSANVAATVPGQAGQKLTF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacatccgccttggcaacgctcttcgccctcgcggccgcgaccccgacgccc
accgtcgacaacgtcgccgacaaggcccaccttgtgaagcgtgcctctgtctccgacaag
gcgacaattggctatgccaccctgaacggggggacttctggaggatccggcggcaccgtc
accactgtctcgtccctcgccgagttcaccgcggccgtgaacgagaaggacaccacgccc
agggtcgttgttgtcaagggcatcatcaagggcactgccaatgtccgtatcggcagcaac
aaatctgtcattggtcttcctggcggaggatttgagggcattggcctgcacgttcgtcgg
cagtcaaacgtcatcattcgcaacatcaagtcttccttcgtcctggcttccacaggtgac
ggtgtcaagatcgagcaaagcaccaacgtgtggatcgaccacagcgagttcagctcggcc
cttgtcgccgacaaggactactacgacggccaggtggatgcctcccacggagccgactac
atcactatctcttacacctacttccatgaccactggaagacttccttgattggacacagc
gagaacaacggcgccgtggacagcggccacctccgcatcacctacgccaacaactactgg
gccaacttcggctctcgtggcccgtccctgcggttcggcaccggtcacatctacaactct
tactacctcaacggcaactctgccatcaacacccgccagaacgcccaggtcctcgtccag
agcaccgtcttcaagaacgtgaccgtacccatcacctcccaagactccgacattgtcggc
tacgccgtgtccatcggaaacgaccttggcggtgctgccaacctcgctcccgtcggcacg
ctgaacgccaactctcccccgtactcttacacgctcctcggctctgccaacgtcgccgct
actgttcctggacaggctggccagaagcttaccttctaa
DBGET
integrated database retrieval system
