Colletotrichum higginsianum: CH63R_11335
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Entry
CH63R_11335 CDS
T08176
Name
(RefSeq) Clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
chig
Colletotrichum higginsianum
Pathway
chig04142
Lysosome
chig04144
Endocytosis
chig05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CH63R_11335
04142 Lysosome
CH63R_11335
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
CH63R_11335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_11335
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chig04147
]
CH63R_11335
Membrane trafficking [BR:
chig04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
CH63R_11335
Exosome [BR:
chig04147
]
Exosomal proteins
Proteins found in most exosomes
CH63R_11335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
TPR_Vps41
TPR_COPA_B
Clathrin-link
TPR_8
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
28870416
NCBI-ProteinID:
XP_018153150
UniProt:
A0A1B7XY01
LinkDB
All DBs
Position
8:1218021..1223284
Genome browser
AA seq
1682 aa
AA seq
DB search
MAPLPIKFQELIQLQTAGVEDSSIGFNSCTLESDSYVCIREKKNEAAQPEVVIVDLKNGN
NVTRRPIKADSAIMHWTRQVIALKAQSRTLQIFDLEKKAKLKSTTMNEDVQYWKWISETS
LGLVTDTAVYHWDVYDPSQAQPVEVFKRNANLNGCQIINYRTNAEGKWMVVVGISQQQGR
VVGSMQLYSKDRGISQAIEGHAAAFGTLRLEGAPADTKLFTFAVRTATGAKLHIVEVDHA
ESNPVFPKKAVDIFFPPEAVSDFPVAMQVSQKYGVIFMVTKYGFIHVYDLETAACIFMNR
ISSDTIFTTCPDTESRGIVGINRKGQVLFVSIDDSNVIPYLLQNPANTDMAIKMASRAGL
PGADNLYARQFEQLFNSGQFMEAAKIAANSPRQFLRTPETIEKFKSLPQQPGQMSFVLQY
FGLLLDKGALNEHESIELAQPVLAQNRLNLLEKWQKENKLTPSERLGDLVRPHDLNMALA
MYVKANVPHKVVAGFAETGQFDKILPYASQAGYQPDYVQLLQHIVRVNPEKGAEFATALA
NNEGGSLVDIERVVDIFQSQGMIQQATAFLLDALKDNRPDQGHLQTRLLEMNLMNAPQVA
DAILGNDMFSHFDKTRIATLCEQAGLAQKALELYEDPAAVKRVVVNIASTPNFNLDWLTG
FFGKLSVEQSLDCLDAMIKHNIRQNLQAVVQVATKYSDLLGPVRLIDLFEKYKTSEGLFY
YLGSIVNLSEDPDVHFKYIEAATKMGQFNEVERICRDSNFYNAEKVKNFLKEARLQEQLP
LIIVCDRFNFVHDLVLYLYQQQQFQSIETYVQRVNPSRTPSVIGGLLDVDCDENIIKNLL
STVNPASIPIDELVSEVETRNRLKLLLPFLEATLAAGNQQQAVFNALAKIYIDSNNNPEK
FLKENDQYDTLTVGKYCEKRDPNLAFIAYSKGQNDLELVNITNENGMYRNQARYLLERAD
RELWTFVLSENNIHRRSVIDQVTATAVPESTDPAKVSEAVAAFLASDLPLELIELLEKIV
LEPSPFSDNANLQNLLLFTAAKADKGKVMDYIHRLDNFSAPDIASACIEVGLHEEAFEIY
KKTGDKTSAVNVLVENVVSIDRAQAFAEEVDLPEVWSKVAKAQLDGLRVSDSIESYIKAE
DPKNYEEVIETAVRAGKDEDLVKYLRMARKTLREPAIDTALAFCYARMDELGELEDFLRG
TNVANVEESGDKAYEEGLYQASKIFYTSISNWAKLATTLVHLGEYQAAVECARKANNIKV
WKQVHEACVEKKEFRLAQICGLNLIVDAEQLQTLVKQYERNGYFDELIGLLEQGLGLERA
HMGMFTELGIALSKYHPERLMEHLKLFWSRMNLPKIIRACEEANLWPELVFCYYHYDEFD
NAALAVIERPENSWEHQQFKEIVVKVANLEIYYRAINFYLEQHPSLLTDLLQALTARIDV
NRVVKMFEKSDNLPLIKPFLVNVQSQNKRTVNNAINDLLIEEEDYKTLRDSVENYDNYDP
VELAARLEKHDLIFFRQIAASIYRKNKRWEKSIALSKQDKLFKDAIETAAISGKTDVVED
LVRYFVDIGSRECYVGMLYACYDLIRPDLVLEISWRNGLTDFAMPYMINMLCQQTKDLAA
LKADNEARKNKEKEQEKDETNTPILGGNRLMITAGPGGMGGAPQAPYGQTNGFAPQPTGF
GF
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcgccactacccatcaagttccaggagctgatccagctccagactgccggcgtcgag
gactcctcaatcggcttcaactcctgcacactcgagtcagactcctacgtttgcatccgg
gaaaagaagaacgaagctgcccagcccgaagtcgtcattgtcgacctgaagaacggcaac
aatgtgacacgacgccccatcaaggccgacagtgccatcatgcactggactcgtcaggtc
atcgctctcaaggcgcaatcgagaacactccagatcttcgacctcgagaagaaggccaag
ctcaagtccaccaccatgaacgaggacgtccagtactggaagtggatcagcgagacctct
ctgggtttggtgacagataccgccgtctaccactgggatgtttacgaccccagccaggcc
cagcctgtcgaggtgttcaagcgcaatgccaaccttaacggctgccaaatcatcaactac
cgcacaaatgccgaaggcaagtggatggtcgttgtgggcatctctcaacagcaaggccgc
gtcgtcggctccatgcagctgtactccaaggaccgcggcatcagccaagccattgagggc
cacgccgccgccttcggcactctgcgcctcgagggtgcccccgccgacacgaagctcttc
accttcgccgtgaggaccgccaccggcgcgaagctgcacattgtcgaggtcgaccacgct
gaatcgaaccctgtcttcccgaagaaggctgtcgacattttcttcccccccgaagccgtt
agcgatttccctgtcgccatgcaggtctcgcagaagtacggcgtcatcttcatggtcacc
aaatacggcttcatccatgtctacgacctcgagactgccgcctgcatcttcatgaaccgc
atttccagcgacaccatcttcacgacctgccccgacacggagtcccgtggcattgtcggc
atcaaccgcaagggtcaagtgctcttcgtttcgatcgacgacagcaatgtcatcccttac
ctcctccagaaccccgccaacaccgacatggctatcaagatggcatcacgagctggcctc
cccggtgctgataatctctatgcgcgtcagttcgagcagctcttcaacagcggccagttc
atggaggccgccaagatcgctgccaactccccccgccagttcctccgaacccccgagacc
attgagaagttcaagtcccttccccagcagcctggccagatgtccttcgtcttgcaatac
tttggccttcttctcgacaagggcgcccttaacgagcacgagtctatcgaactcgcccag
ccggttctcgcccagaaccgtctcaacctgctcgagaagtggcagaaggaaaacaagctt
accccttcagagaggctcggtgacctggtacggccccacgatttgaacatggctctcgcc
atgtacgtcaaggccaacgtcccccacaaggtcgttgctggctttgccgagaccggccag
ttcgacaagatcctgccttacgcctcccaggctggctaccagcctgactacgtccagctt
ctccagcacattgtccgtgtcaacccggaaaagggcgctgagtttgccacagccttggct
aacaacgagggtggttcgttggtcgacatcgagagggtcgttgacattttccagtcccag
ggcatgatccagcaggcaactgccttccttttggacgccctcaaggacaacagacccgac
cagggccaccttcagactcgtctcctggagatgaacttgatgaacgctccccaggtcgct
gatgctattcttggaaacgacatgttctcccacttcgacaagactcgcatcgcgaccctg
tgtgaacaggctggcttggcgcagaaggccttggagctctacgaggaccccgcggctgtc
aagcgtgttgtggtgaacattgcttccacccccaacttcaacctcgactggttgaccggc
ttcttcggcaagctgtccgtcgagcagtccctggactgcttggacgccatgattaagcac
aacatccgccagaacctccaggctgtcgtccaggtcgccaccaagtactccgatctgctt
ggtcccgttcgcctaattgaccttttcgagaagtacaagacttccgagggtctgttctac
tacctcggcagcatcgtcaacctctcggaggaccccgatgttcacttcaagtacatcgag
gctgccaccaagatgggtcagttcaatgaggtcgagcgcatctgcagggacagcaacttc
tacaatgccgagaaggtgaagaacttcttgaaggaggctagactccaggagcagttgccc
ctcatcatcgtctgcgaccggttcaactttgtccacgacttggttctctacctctaccaa
cagcagcagttccagtccatcgagacttacgtccagcgcgtcaaccccagccggacgccc
tccgtcattggcggtcttctggatgtcgactgcgacgagaacatcatcaagaacctgttg
tcgactgtcaaccccgcatcgatccccattgatgagctcgtctccgaggtcgagacccgc
aaccgcctcaagcttctcctgcccttcctcgaggccacccttgccgccggaaaccagcag
caggccgtcttcaacgctctcgctaagatctacatcgactcgaacaacaaccctgagaag
ttcctcaaggagaatgaccagtatgacaccctcactgttggtaaatactgcgagaagcgc
gatcccaacctggccttcatcgcctactccaagggccagaacgaccttgagctcgtcaac
atcacgaacgagaacggcatgtaccgcaaccaggcccgttacctgcttgagcgggctgac
cgcgagctgtggacctttgtcctgagcgaaaacaacatccaccgccgttccgtgatcgac
caggtgactgccaccgccgttcccgagtccaccgaccctgccaaggtctccgaggctgtc
gccgccttccttgcctccgatctccctctcgagctcattgagttgctcgagaagatcgtc
ctggagccttcgccgttcagcgacaacgccaacctccagaacctgcttctcttcaccgct
gccaaggcagacaagggtaaggttatggactacatccaccgcttggacaacttcagcgct
cccgacattgcgtccgcttgtatcgaagtcggtcttcacgaggaggccttcgagatctat
aagaagactggcgacaagacctccgctgtcaacgtcctcgttgagaacgttgtgagtatc
gaccgcgcccaggctttcgctgaggaggtcgacctgccggaggtctggagcaaggtcgca
aaagcccagcttgacggcctccgtgtcagcgactcgatcgagtcgtacatcaaggccgag
gaccccaagaactacgaggaggttatcgagacggctgtccgcgccggcaaggacgaggac
cttgtcaagtacctgcgcatggctagaaagacgctgcgtgagcccgccatcgacactgct
cttgccttctgctatgcccgcatggacgagctcggcgagctggaggacttcctccgaggc
accaacgtcgccaacgtcgaggagtcgggtgacaaggcctacgaggagggtctctaccag
gcttccaagatcttctacaccagcatctccaactgggccaagctggctacgaccctcgtc
cacctcggggagtaccaggccgccgtcgagtgtgctcgcaaggccaacaacattaaggtc
tggaagcaggtccacgaggcttgcgtcgagaagaaggagttccgcctcgcccagatctgc
ggtcttaaccttatcgtagatgccgagcaactgcagacccttgtcaagcaatacgagcgc
aacggttacttcgatgagctcatcggcctcttggagcagggtcttggtcttgagcgtgcc
cacatgggcatgttcaccgaactcggtattgctctgtccaagtaccacccggagcgtctc
atggagcacctgaagctcttctggagcagaatgaacctccccaagattatccgtgcctgc
gaggaggcgaacctctggcccgagttggtgttctgctactaccactacgatgagtttgac
aacgccgccctggcggtcattgagcgccccgagaactcgtgggagcaccaacagttcaag
gagattgtcgtcaaggttgccaacttggagatctactaccgcgccatcaacttctacctc
gagcagcacccctcgctgcttacggacctgctccaggcgctcactgctcgcatcgacgtt
aaccgtgtggtcaagatgtttgagaagagtgacaacctcccgctcatcaagcctttcctc
gtcaacgtccagtcccagaacaagcgcacggtcaacaacgccatcaacgatcttttgatc
gaggaggaggactacaagacgctccgtgactctgtggagaactacgacaactacgatccc
gtcgagctggccgctcgtctggagaagcacgacctgatcttcttccgccagattgcagcc
agcatctaccgcaagaacaagcggtgggagaagtcgatcgctctctccaagcaggacaag
ctctttaaggatgccattgagactgctgccatctctggcaagacggatgttgtggaagac
ttggtccgctacttcgtcgacattggcagccgcgagtgctacgtgggcatgctctatgct
tgctacgatctcattcgccccgaccttgtcctcgagatctcctggcgcaacggcctcacc
gactttgctatgccgtatatgatcaacatgttgtgccagcagaccaaagacctggcagct
ctcaaggccgacaacgaggcgcgcaagaacaaggagaaggagcaggagaaggacgagacc
aacactcccattcttggcggcaaccgcctcatgatcactgccggcccaggcggcatgggt
ggcgcacctcaggcaccttacggtcaaacgaatggcttcgcgccccagcctaccggcttc
ggattctag
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