Colletotrichum higginsianum: CH63R_11452
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Entry
CH63R_11452 CDS
T08176
Name
(RefSeq) Pectate lyase Pel-34K
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_11452
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CH63R_11452
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF5123
Motif
Other DBs
NCBI-GeneID:
28870533
NCBI-ProteinID:
XP_018153267
UniProt:
H1V1R1
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Position
8:complement(1629094..1630118)
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AA seq
320 aa
AA seq
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MRFSSSLLVLLQGAAAVHGGVVERQATGCLASAPGFASLNGGTTGGAGGTEVTVKTQADL
EKYASASGKYVIKVSGRITITPLGKEIKVASDKTVIGLGTSGELYQGGLGLNGAKNVIIR
NLKIGHTNLNDGVENDRDGIQADTVSNIWIDHCLFENGGDGLLDLRKDTTFFTVSNNIFR
NHDKNFGIGWTENVSARGTINHNWFDKTNQRNPSADNLAQVHLYNNYLYGITSYGHYARG
STNARVENVFFENTKNPLTKDAGAVLNASGNTYKSCTGTIAANSGTSFNPKSYYSYTLTP
TADVPAYVKANAGPKASVCS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagattctcttcctctcttctcgttctccttcaaggagccgcagcggttcatggcggc
gttgtagagaggcaggccacgggttgcctggcttccgctccggggtttgcttctctcaac
ggcggaacaaccggcggcgccggcggcacagaagtcaccgtcaaaacccaggcggatctt
gaaaagtacgccagcgcatccggaaagtatgtcatcaaagttagcggccggatcaccatc
acgcctctcggcaaggagatcaaggttgcgagtgacaagaccgtcatcggcctcggcaca
tctggcgagctctaccagggcggattggggttgaacggggctaagaatgtcatcattcga
aacctgaagatcggccacacgaacttgaacgacggcgtcgagaacgaccgcgacgggatc
caggccgacaccgtcagcaacatctggatcgaccattgtctctttgagaacggcggcgac
gggctgctcgacctgcgaaaggacaccaccttcttcaccgtctcgaacaacatcttccgc
aaccacgacaagaacttcggcatcggctggacggagaacgtctcggcccgcggcaccatc
aaccacaactggttcgacaagaccaaccagcggaacccttccgccgacaacctcgcccag
gtccacctgtacaacaactacctctacggcatcacctcctacggccactatgcccgcggc
agcaccaatgcgcgggtggagaacgtcttctttgagaacaccaagaacccactgaccaag
gacgccggggccgtgctgaacgcgtcggggaacacgtacaagagctgcaccggaaccatt
gcggccaactctggcacctccttcaaccccaagagctactattcttacactctcacaccg
actgccgacgtgcctgcctatgtcaaagctaacgcgggccccaaggcctctgtttgctct
taa
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