Colletotrichum higginsianum: CH63R_11747
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Entry
CH63R_11747 CDS
T08176
Name
(RefSeq) SNF2 super family protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_11747
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_11747
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CH63R_11747
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CH63R_11747
SLIK complex
CH63R_11747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
Cdh1_DBD_1
CDH1_2_SANT_HL1
AAA_22
DHR-2_Lobe_C
Motif
Other DBs
NCBI-GeneID:
28870828
NCBI-ProteinID:
XP_018153562
UniProt:
A0A1B7XZ74
LinkDB
All DBs
Position
8:<2540783..>2545813
Genome browser
AA seq
1599 aa
AA seq
DB search
MMSSPLEPGPTNGYRSPEGDSPSPVADAGHQSDSDLSDVRDNAARLASPSLSPDPNDSTG
YINGAPDFAESESSGDENNASDDADFDMDEDAASIVQSDGAGDVHSSSNDSQRPTKRKAA
AREDDFIKANPELYGLRRSSRPTQQRRMVDSSDETDSDVAPTNRRTVKRRRVETSRQSSK
RGTPARQPSTDSDSDSDNYGGARAKSLQKKARRQREAQPSLLLAEKRWSSRRAAQVQQGA
YEESDVDDEEDGSELTPNYYAADVVDDSPYIDKVLRHKLKDGLELSWSSTRNDFEYYIKW
QGKSHLHDTWETAETLRSMRGYRRVENYFRTIVEHELLIRFGEDIPPETKEQFFLDRERS
EEALEDYTKVDRVVAIRDGDDETEYLVKWKGCYYDECTWEVASAIKSDFQDKIDQFLDRS
SRSWVSNRKESNPDTRTRMTKLEAQPDYIKGGELRSFQLRGLNFLCLNWTRANNVILADE
MGLGKTVQSVSFLSWLRNEREQEGPFLIVAPLSVIPAWGDTFDHWSPDMNYVVYLGNETS
RSTIRDNELMVNGNPKKPKFNALITSYEMILQDWQFLQQIKWQALLVDEAHRLKNKESQL
YARLVGFGVPCKILITGTPIQNNLAELSALMDFLNPGKVVIDEELENLAGNDTQEKLQDL
HKSIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLEYYKNILTRNYAALSNATGQKNS
LLNIMMELKKVSNHPYMFAGAEDRVLAGSTRREDQIKGLIASSGKMMLLDQLLTKLKKDG
HRVLVFSQMVKMLDILSDYMALRGYKFQRLDGTIAAGPRRMAINHFNAEDSDDFCFLLST
RAGGLGINLMTADTVVIFDSDWNPQADLQAMGRAHRIGQKKPVSIYRLVSKETVEEEVLE
RARNKLLLEYLTIQAGVTDDGKAFREEMNKKGLKIDGPNSAEDIQLILKMRSQKMFEQSG
NQERLEQLDIDSILENAEITKTKVDDKMNLSSGGIDWDNFMQYTDVKVDDLTLDWDQIIP
ADELAVIKAEEDKRKNEEYVAKVAAESAPRRVTMKNRNETDRSDRLAKKRQREEQQRQEA
EEQRALLSDPKRPLNEKETRNLLKAFFRYGSMEDRGDEIVQEARLAERDRDYLKSILDDF
VKTCEDALNENTARLMDDERKLGKSLTKKDKKAVLVDFGEVRKMNAETAVERPQQLRLLR
QTIRKNDDFKTFRLADATKAAHYSCEWGAREDGMLLVGIDKYGFGAWAQIRDDDQLDMSD
KFFLEEHRIEKKEERIKGAEKVVNSPGAVHLVRRSEYLLSVLQAKHSTDPLAHRAVENHH
RNNKRLANGHRRSDVGSGAASPAPPALKKNGSHRDRERSHGDHHRSRSNADERGTPRPES
KRKHSGHDEGRIPKHRRTEETRRTKSDEQQSPRSDRPRNRDEGERSSKHRRPEDHRHGDE
RRRSSNTPRASQPDSERRNQALRRLDQLRKMGDNKEEREKDADAMLWYLLKPVRGNFEAI
LVTTKERVKSSKERAKIFGEELVVIGNFLDREFVQERDNALKNRFWEFLANLWPVDSTSN
EVTGDRLSAMYRVLQAREVKKHNGDKPAAASTNGTAATS
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctagccccctcgaacccggtcccaccaacgggtaccggtcaccggagggtgat
tctccctctccagtagccgatgctggtcaccagagtgatagtgatctctcggatgtgcgc
gataatgccgcacgtctcgcttcaccgtcgctgtcgccggatcccaatgactcgaccggt
tacatcaatggcgcacccgacttcgccgaatcagaaagttccggcgacgaaaataacgca
tctgatgatgccgactttgacatggacgaagatgcggcgtccattgtccagagcgacggg
gccggcgacgtccactcgagctctaacgattcccagcggcctacgaagcggaaagctgcc
gctagagaggatgacttcatcaaggcaaaccctgagctatacgggttaagaagaagctca
cgtccgacgcaacagcgcagaatggtcgattcctctgatgaaaccgattctgatgttgct
cctacgaacaggaggacagtgaagagaagacgcgtcgagacatccagacagtcttcgaaa
cgaggtacacctgcgcggcaaccgtcgacagactccgactccgactctgataactacggc
ggtgctcgcgcgaagagtctccagaagaaggcacgtcgccagcgtgaagcacagccgagc
cttctcctcgccgagaagcgttggtcgagcagaagggctgcccaagtacagcaaggcgcc
tacgaggagagcgacgtcgatgacgaggaagacgggtctgaactcactcccaactattac
gcggcagacgtagtcgacgattccccatacatcgataaggtcctcagacacaagctcaaa
gatggtctcgaacttagctggagctcaacgagaaatgacttcgagtattacatcaagtgg
cagggaaagtcgcacctacacgatacatgggagacggcggaaaccctgcgtagcatgcga
ggctaccgcagggtcgagaactacttcagaaccatcgtggagcacgagcttctcattcgg
ttcggcgaggacatccctcccgaaactaaggaacagttctttctggaccgcgaacgatcc
gaagaagcactggaagactacaccaaagtggacagggttgtcgctatccgcgacggcgat
gatgagaccgagtacttggtcaagtggaagggctgctactacgacgaatgtacgtgggag
gttgcgtcagccatcaagtcggactttcaggacaagattgaccagttcctggatcggtca
tcacgttcatgggtttctaaccgcaaagagtccaatccggatacacggacaagaatgacc
aaactcgaagcacaacccgactatattaagggcggcgaactgcgttcattccagctcaga
ggtctgaatttcttgtgtctcaactggactcgcgccaacaacgttattcttgccgatgag
atgggcctcgggaaaaccgttcaaagcgtctcgtttctcagctggcttcgcaacgagcgc
gaacaagaaggcccgttcctcatcgtcgcgcccctcagcgtcatccccgcatggggcgat
accttcgaccactggtctccggacatgaattacgtcgtctaccttggcaacgagacttcc
cgcagcaccatccgtgacaacgagttgatggtcaacggcaatcccaagaagcccaagttc
aatgccctcattacctcgtatgagatgattctccaggactggcagtttcttcagcaaatc
aagtggcaggctttgctcgtcgacgaagcccatcgtctgaagaataaagagtctcaactg
tatgcgagactcgtcggtttcggggtaccgtgcaagatcctgatcacaggcacgcccatt
cagaacaacctggctgagctttcggcactcatggacttcctcaaccccggaaaagtcgtc
atcgatgaggaactagagaacctcgctggaaatgatacccaagaaaagctgcaggaccta
cacaagtcaatcgccccttacatcttacgccgcacaaaggagactgttgagtcggatctt
ccacccaagaccgaaaagatcatccgagtcgagctttcggatgttcagctggagtactac
aagaacatccttacgaggaactatgctgctctgtccaacgccacgggtcagaagaactcg
ttgctcaacatcatgatggagctgaagaaagtgagcaatcatccgtatatgtttgccggt
gccgaagacagagtactcgccggcagcacccgtcgggaggaccaaatcaaaggcttgatt
gccagcagtggaaagatgatgcttctcgatcaacttctcacaaagctcaagaaagacggt
cacagagtccttgttttcagtcagatggtcaagatgctagatattctcagcgactacatg
gctctccggggctacaaattccaacgtcttgacggcactatcgccgcgggtcctcgccgc
atggcaattaaccatttcaacgctgaggatagcgacgacttttgttttctgctttccacc
agagcaggaggattgggtatcaatttgatgaccgccgatactgtcgtcattttcgactcc
gactggaacccacaagcagatctgcaagcgatgggacgcgcccaccgcatcggacagaaa
aagcctgttagcatttaccgtctggtatccaaagaaactgtcgaagaagaagtcctcgag
cgcgctcgcaacaagcttctgcttgagtacctcacaattcaagctggcgtcactgatgac
ggcaaggcgttccgcgaggaaatgaacaagaagggtctaaagattgatggtccgaactct
gcggaggatatccagttgattctcaagatgcgctcacagaagatgtttgagcaaagtggc
aaccaagagcgtctcgaacagctcgacattgactctatcctggagaacgccgaaatcacg
aagaccaaggtcgacgacaagatgaaccttagcagtggtggtatcgactgggacaacttc
atgcagtacaccgatgtgaaggtggacgacttgaccctcgactgggaccagatcattcct
gccgacgagcttgccgttatcaaagccgaggaagataagcgcaagaatgaggagtatgtg
gcaaaggtcgctgctgagagcgctccgcgcagggtgacaatgaagaaccggaatgagacg
gacagatcggaccgtcttgcgaagaagcgacagagggaagagcagcaacgccaggaagct
gaggaacagcgtgccctgctatctgacccgaaacgccccctcaatgagaaggaaacacga
aaccttctgaaggcttttttccgatatggttctatggaagaccgcggtgacgaaatcgtt
caagaagctcggctcgccgaacgcgaccgcgattacctcaaatcaatactggacgacttt
gtcaagacttgcgaagacgcactcaacgagaacactgcacgtctcatggacgatgagcga
aaactcgggaagtcattgacgaagaaggacaagaaggccgtcctggtcgactttggcgag
gtgcggaagatgaatgccgagacagctgtcgaacgtccgcagcagcttcgcctgctgagg
caaaccattcggaagaatgatgacttcaagacattccgtctcgccgacgcgaccaaggcc
gcccactactcatgtgaatggggtgcgcgagaggatgggatgcttcttgttggcattgac
aagtatggtttcggcgcttgggcgcagatacgagacgatgaccagctggacatgtccgac
aaatttttcctcgaagaacatcgcatcgagaagaaggaagagcggatcaagggagctgaa
aaggtggtcaactcccccggtgctgttcatctcgttcgccgttcagagtatttgctctct
gtgcttcaggcgaagcattcaacagacccgttagctcacagagccgtcgagaaccaccat
cggaacaataagagattggccaacggacatcgtcgcagtgatgtgggcagcggcgcggcg
tcacctgctccgccagcactcaagaaaaacggctcgcatcgggatagagagcgcagccac
ggcgaccaccatcgcagccgcagcaacgccgatgagagaggcacgccgcggcccgagtcg
aagagaaaacactcgggccacgacgagggccgcatccccaagcatcggagaacggaagag
acgcgacgcacaaagagcgatgaacagcagtctcctaggtctgacagacctcggaatcgt
gatgagggcgagcgtagcagcaagcaccgtcgcccggaggatcatcggcatggagacgaa
cgccggcgctcgagtaataccccgcgagccagtcaacccgacagcgagcgtcgcaaccaa
gcacttcgaaggcttgaccaacttcgtaaaatgggagacaacaaggaggagagagagaag
gatgcggacgccatgctgtggtatttgctgaagcctgttcgtggaaacttcgaggctatt
ctggttacaacaaaggagagggtcaagtccagtaaagaacgagctaagatctttggcgag
gagctggttgtcattggcaactttctggaccgcgaatttgtccaggagcgagacaacgcg
ctcaaaaaccgcttctgggagttcctggcaaatctatggcctgttgatagcaccagcaat
gaggtgacgggcgatcgattgagtgccatgtatagagtcctgcaggccagagaagtgaag
aagcacaatggagacaagccggcagcggcgtcgacgaatggcacagcagccacttcctaa
DBGET
integrated database retrieval system