Colletotrichum higginsianum: CH63R_11751
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Entry
CH63R_11751 CDS
T08176
Name
(RefSeq) DNA polymerase
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CH63R_11751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_11751
Enzymes [BR:
chig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH63R_11751
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
CH63R_11751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
HTH_3
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
28870832
NCBI-ProteinID:
XP_018153566
UniProt:
H1VDL8
LinkDB
All DBs
Position
8:2564378..2566852
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AA seq
824 aa
AA seq
DB search
MTDTNTSFRDKARFFRQLETLGGQSDDNDNDEFQEAELRNRQQLKAFQAAVQPRQPLQEK
TLQEPQSQPQSQPQPQSQSPLPQRLSPTLRQTSSVPVPASPTDFGRKDFIERTPLAEIKG
SGRREAPAADSFIEDTPIPDSLARPPLQPIPSLTRSVATPLSIAKHMLPRRVDNSPSVAA
MKKRKRDPPIKTVPEEQQIFRGLHFYFIPNDDIAPARKIRIRKAQEFGASWVRSLESATH
VIVDRNLDWKSIESIVLPKNGTSPFLVLSDEYPLDCLRFKTLLNAEQKQYRVSGCPEPFS
APADPPAESRGVQPLTTILPDLPLKSRKKNPQKWEYVPPSTPPRDQQSAGITAEEDVAGA
PTSALMDITDIVQPPNTYRAMRQGSINSDSGSPSVIEKPTSTPEDDLEGIISQMQQFRSL
PLGHDDDDTTTSTQTPEEDSSGDGNSSDDERQWKKRAVVKARGRKDMAWEDKFACHKGGT
KSGDETNPNGRTIEILQQMCNYYERINDTWRPIAYRKAITQLKRQPNKISTAKEAIRLPG
VGQRLADKIEEIVTTNRLQRLENAEQEPMDEILQIFLRIYGVGSIQASHFISQGFRTLED
LKEKARLTPNQRIGIDHYDDLNTRIPRSEIELLGAVVRSEAAKLDPAVQLIIGGSYRRGA
DDSGDIDFLVTKKGTRATSELVPFLHQLVKTLETQEFLVARLAGSREESDGSKWHGCCVL
PETRGVNDENYRRVWRRVDFLLVPETEMGAALIYFTGNDIFNRSIRLLASKKGMRLNQRG
LYKDVMRGPGRVKLTEGELVEGQDERKIFEILGVKWREPHERWC
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacaaacacgtccttcagagacaaagcgcggtttttccgccagcttgaaact
ctcggtggacaaagtgatgacaacgacaacgacgagtttcaggaggctgagctacgtaat
agacaacaactaaaggccttccaagccgcagtgcaaccccgacagccactgcaagagaag
acactacaagagccgcagtcgcagccgcagtcgcagccgcagccgcaatcgcagtctccc
cttccccaacgactgagcccaacccttagacagacatcgtccgttccggtcccggcttca
cctacggatttcggacggaaggacttcatcgagcggaccccacttgccgaaatcaagggt
tccggaaggagggaagctcctgccgcggatagcttcatcgaagacacacccataccggat
tccttggctcggccaccgcttcagccaattccaagtctcactagaagcgtcgctacgcct
ttgtcaatcgccaagcacatgctgcctcgccgggtcgacaattccccctctgtcgccgcc
atgaagaagaggaagcgagaccctcccatcaagactgtgcccgaggagcagcagatcttt
cgaggcttgcatttctacttcattcccaacgatgacattgcaccggccaggaagatccgt
atacggaaagcccaggagttcggcgcgtcttgggtgaggtctttggagagcgcgacccac
gttatagttgacaggaacttggactggaaaagcatcgagtcgatcgttctaccgaagaat
ggaacatctccattcctcgttctcagtgacgagtaccctttggattgtctaaggtttaaa
actctgctcaatgctgaacagaagcagtatcgagtctctggatgcccagaaccattttct
gccccagcggatcctccagccgaatctcgcggtgtccagccattgacaacaatcttgccg
gatttgccactcaagtcccgtaagaagaacccgcagaaatgggaatatgtcccgccatcg
actccacccagggaccaacagtctgctggaattacggccgaggaggatgtggctggtgca
ccaacatctgccttgatggatatcacagatatcgtacagccaccaaacacatatagggcc
atgaggcaaggtagcattaactccgatagtggatctccttcagtcattgagaagccgaca
tccacacccgaggatgatctggaaggtattatttcacagatgcaacagtttaggagtcta
ccgctgggccatgacgacgatgacacgacaacctcgacgcaaacgccagaagaggactct
agtggagatggaaatagctccgatgacgagcgccaatggaagaagagggcagttgtaaaa
gctcggggccgtaaagacatggcgtgggaggacaagttcgcatgccataaagggggcacc
aaaagtggtgacgagacgaacccgaatggtcgtacaatcgagattttgcagcaaatgtgc
aattactacgagcgtatcaacgacacctggcgtcccatagcttacaggaaggccataaca
cagctcaagcggcaaccaaacaagatatctacggccaaggaagcaatccgactgcctggg
gtgggccaacgattggctgacaagattgaggaaatcgttacgacgaaccggcttcaacga
ctggaaaatgcggaacaagagcccatggacgagatcttgcagatcttcctcaggatttac
ggcgtgggcagcatacaagcaagccacttcatttcgcaagggtttcggacactagaggac
ctcaaggagaaagcgaggctcaccccaaaccagcgaatcggcatcgatcactacgacgac
ctcaacacgcgcatccctcggtccgagattgagcttctcggggcagtcgtgagatcggag
gcggcaaagctagatcctgcagtgcagcttatcattggagggagttatcgtcgaggcgcc
gatgacagcggcgacattgatttcctcgtcaccaagaaggggacgagagcgacgtctgaa
ctcgtaccattcttgcaccagttggtcaagacactggagacgcaggagtttctcgttgcg
agacttgcaggatctcgagaggaatcggacggcagcaagtggcacgggtgctgcgttctc
cctgaaactaggggcgtcaacgacgaaaattaccggcgggtttggaggcgtgtggacttc
ctcttggttccagagacggagatgggtgcggcgctgatatatttcacgggaaatgacatt
ttcaacagaagcatacggttgttggcatcgaagaaggggatgcggcttaatcagaggggc
ctctacaaggacgtgatgaggggtcctgggcgcgtcaaactgacagagggcgagctggtg
gagggacaggacgaaaggaagatctttgagatactgggggtcaagtggagggagccccat
gagagatggtgttga
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