Colletotrichum higginsianum: CH63R_11821
Help
Entry
CH63R_11821 CDS
T08176
Name
(RefSeq) integral membrane protein
KO
K28812
TRP-like calcium channel
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chig02000
]
CH63R_11821
Transporters [BR:
chig02000
]
Other transporters
Pores ion channels [TC:
1
]
CH63R_11821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP
TRP_N
Motif
Other DBs
NCBI-GeneID:
28870902
NCBI-ProteinID:
XP_018153636
UniProt:
A0A1B7XZB6
LinkDB
All DBs
Position
8:<2839475..>2843165
Genome browser
AA seq
1212 aa
AA seq
DB search
MRMPPSAPPRDLFYPESFPRHAATARPEHGKPALSLPFPPMKSSPSLERPTIRSLHQGGS
RYPSPRSLTMDCGRTSRMRPLPSRSFAALLVLLVCLLIRPVSAVLIPFDNCLPDSYRNFN
PLPLQWNPVYIDARFDTENPDHSLQIIVWGNVAGSYRDVTLPPPNDPLWVDPNYTDGKIL
DFTRQGNKVTTLASKVNVLTYEPFSNVSSFCDYSLVNGSCPLSPVFNNTTIAIPYGNLPS
VNLTANMGSSYAFASLAATLQIIYGDELATHIGCASATVTPDLGGIHGLLRYLPLVVLLF
VGFATMFASVFSPWGSTDIFHWTANYGRDADLLRLVTPGFGDCLQYIQFVALTGGLTLNY
PGFYQPVVSQVSWSALMFNESFVSKSPGWQSIQDGIYVTNGSYGLHRYAQMVGMADVEDI
WAGTMVWVCVIVAALFVLIQIGFFCRWVLRFISDTPEEDLRAKNIPFSVGNVVRVVFNYL
LLPIVALSTFQLVVASQSRDFAVALAVITLLILVCFAAWLLYLIFRTRPRAVLFDDLPTV
LLYGPLYNTYSDEAAAFALIPVTLTFIRGIAIGAVQPVGIVQIVLLAICEVIHVLTLHAF
RPFQSPTSMNAYHTLFSVLRFTTVMLMVAFVPQMGVTEGPKGWIGYTILLIHACVLVLGF
FLNALITIIEVTARLLGAGGDDTRGLTRGGLSKIFGMRQLQRRTSRRGHGPSRASQLSTT
GMLDADETSKTGYVMRGGRLRSESAGSGFLLRSQQRSSSALDSIDPYTGQARNLDSGSNF
TPTTPGEVSTFSFLPSPAAATRPPAAVTVESADPYYRPPRRRGDTLNGSSTSLPHRASVA
DSRRYSQAGAHLGDAVADLEAQLSRGPTPAPQAINLTPRADYSTREVDFYYGVRGPALNS
EGVGRKLRTGPADPTKPMATAAGWFRTMFGGKSKEKGKGFEVVRSSRMPPAMRAAADAEY
DAEPPPEGIPVAMGVLRNGPIESDDDEPKNKPARKHPDTEGTTENLLTNDGISVISSESE
IEEIGLPKVSDEPPTLPGIASSGSFNLPSRTPSKASRSASQKYRRQSTESDIPEIPRKSS
KRDSGMARGHSPAPSFNLIPPTSPSRGEHSGADLPPAQDGPASSPNPGRLPFQRSESHQK
RLSSNGSSLEEFSIRRTPSTDRPTSYGVVAQHSISRVDPGSDQQVDLLGTSAELVDERGL
PSRTSSAGGRAL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgcctccttccgctcctccacgagacctgttctatcccgaaagttttccaaga
catgcagctaccgctcgccctgaacatgggaaacccgccctttcgctacctttcccaccc
atgaagtcttcaccctcgctggagaggccgaccattcgctcgcttcatcaaggaggatct
cgatatccttcaccacgatcgctcaccatggactgtggccgtacctctcgaatgcggcca
ctgccttcccgctcgttcgccgcccttctcgtcctcctcgtctgcctgttgatacggccc
gtatccgccgtactgatccctttcgacaactgcctccccgacagctacagaaattttaac
ccgctgcctctgcaatggaaccccgtttacatcgacgctcgtttcgataccgaaaacccg
gaccactctcttcagatcattgtatggggcaacgtggcgggctcgtatcgtgacgtgact
ttgccgcctccgaatgatccgctctgggtcgaccctaactataccgatggcaaaatcctt
gacttcaccagacaaggcaacaaagtcaccactctcgcgagcaaggtcaatgtcttgact
tacgaacctttcagcaatgtatccagcttctgtgactacagccttgtcaatggctcctgt
cccctcagcccagtcttcaataacacgaccatcgcgattccgtatggcaacttgccttca
gtaaacctgacagccaatatgggctcgtcctatgccttcgcctcgcttgctgcgacactt
cagatcatctatggagacgagttagccacgcatattggctgtgcttctgccaccgtaacc
ccggatctgggcggtatccacggccttctgcgttacttgccactcgttgtgctcctcttt
gtcggatttgcaaccatgttcgcctctgtctttagcccgtggggctcgacagacatcttc
cactggacggccaactatggacgtgatgccgatttgctacgcttggtgacgccggggttc
ggagactgtctccaatacatacaattcgtggctctcaccggcgggctgacgctcaactac
ccagggttctatcagcctgttgtcagccaggtgagttggtccgcattgatgtttaacgag
agcttcgtgagcaagtccccaggctggcagtcgattcaagatggcatctacgtcaccaac
ggatcttatggactgcaccgctacgcacagatggtgggcatggccgatgtcgaggatatc
tgggctggcaccatggtttgggtttgcgtcatcgtcgctgccctattcgtcctgatccaa
atcggtttcttctgccgctgggtcctccggttcatcagcgacacccctgaagaagacctg
cgagccaagaacattcccttctccgtgggtaatgtcgtgcgagtcgttttcaattattta
ctgctgcctatcgtggcgctgtcgactttccagctggtcgttgccagtcagtcgcgcgac
ttcgctgtggctttggccgtcatcactctcctcatcctggtctgctttgccgcatggctc
ctgtacttgattttcaggaccagaccgagagctgttctgttcgatgacctgccgactgta
ctgctctacgggccactctacaacacatactcggacgaggccgcggccttcgcgctcatc
ccagttacgctcacatttattcgcggcattgcgatcggcgccgtacagcccgttggaata
gtccaaatcgttctgctcgccatctgtgaggtcattcacgtgctgaccctccacgcgttt
cgtcctttccagtctccgacatccatgaacgcctatcacacccttttctcggttttgcga
ttcacgactgtcatgctcatggtcgcattcgtgccgcaaatgggtgttactgaaggtccc
aagggatggatcggctacacaattctgctcattcacgcctgtgttttggtcctcgggttc
ttcctgaacgccctgataaccatcatcgaagtgacggcacgactccttggcgccgggggc
gatgacacccgcggtctcactcgcggtggtttgtcaaagatatttggcatgcgccagttg
cagcgtcgtacatctcggagaggccatggcccctcccgggccagtcagctgtcaacgacg
ggcatgctcgatgcagacgaaacatcaaagactgggtatgtgatgcgtggtggcagatta
aggagcgagtccgcaggtagtgggtttctcctccgaagccaacaacgcagctcttctgct
ctcgacagcatcgacccctatactgggcaagctcgcaaccttgacagcggtagtaacttt
acaccaacgacgcccggtgaagttagcacattttctttcctcccgtctcccgctgccgcc
acccgccctcccgcggctgtgaccgtcgaatccgcagacccttattacagaccaccgaga
cgccgtggcgataccctgaacggatcatccacgtctttaccacatcgggcctccgttgcc
gactcccgtcgctacagccaagctggcgcgcatctcggagatgctgtggcggacttggag
gcccagttgtcgagggggcctacaccagccccacaggctatcaatctcaccccgagggca
gactactcgaccagagaggtcgatttctattacggtgttcgaggtcccgctctcaactcg
gagggcgtaggccgtaaactaaggacaggtcccgctgacccgactaagcccatggccaca
gctgcagggtggttccgcaccatgttcggtggtaagagcaaggaaaagggcaaggggttc
gaggtggtgcgaagctcgcgaatgccaccagccatgcgcgccgcagccgatgccgagtac
gacgcagagcctccgccagagggcatcccggtggccatgggtgtcttgagaaacgggccc
atcgagtccgacgatgacgaaccgaaaaacaaaccagcacggaagcatcccgacacggag
gggacgacggaaaatcttctaactaacgacggtatctcggtcatatcatccgaatcggaa
attgaagagataggcctaccgaaagtgtctgatgaaccaccaaccttgccaggaatagcg
agttcgggtagcttcaacctgccaagccgaaccccttcaaaggcaagtcgatctgcttct
cagaagtacaggcgccagtccacggagtccgacattcccgagatccctcgaaagagctcg
aagagagattctggcatggcacgtggacactcgccagccccttcgttcaatttaataccg
cccacttcgccttcacgcggcgaacattctggagcagatttgccccctgcacaggatggt
cctgcatcatcaccaaaccctgggcgacttccctttcagcggtcagaatcacaccagaaa
cggctgtcttctaacgggtcatcgctggaagagttcagcatccgcaggacgccgagcact
gacaggccgaccagttatggcgttgttgctcaacacagcattagcagagtggatcctgga
tccgaccaacaggttgatctcttagggacttccgcagagctcgtcgatgaacgagggctt
cccagcagaacctcttcggcagggggccgggctctttga
DBGET
integrated database retrieval system