Colletotrichum higginsianum: CH63R_11824
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Entry
CH63R_11824 CDS
T08176
Name
(RefSeq) CPL domain-containing protein
KO
K14844
pumilio homology domain family member 6
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_11824
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_11824
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
CH63R_11824
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CH63R_11824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
28870905
NCBI-ProteinID:
XP_018153639
UniProt:
H1UXJ3
LinkDB
All DBs
Position
8:<2846852..>2849037
Genome browser
AA seq
703 aa
AA seq
DB search
MASSNGVKRKSAPAGKGASDGKFSKKAKIDSTKKAEPVETLESDNEDDFDNESLDSDDGG
VQLNPRDRAQQAQAKGKKEGANGADKNKAFERGQNSRESHAIQKKLALERKAAKPLADEL
ARTKKIWERLRRKSHVPSEERKQLVDELFTIITGRIKEFVMKHDATRAVQTALKYATAAQ
RKQITRELQGTYTQLAESRYAKFLIAKMVVQADGEIKDLIIPEFYGKVRKLINHPEASWI
LDDIYRQIATKEQKAILLREWYGPEFALLERSKDEKPTSDLAEILEKNPSKKQPILKSLH
DMINSLVQKKMTGFTMLHDAMLQYFLNIKPGTEDFNLFVEMIKDDEEGDLLKNMAFTRSG
SRLVALLLANGTSKDRRNLLKAYKDNFVLMSGDAFAHIVILTAFDVIDDTKMTSKAIFPE
LIGDGKETATDNIVVSTTNPYARATLLYLLEGQSRALFPANMSENLAILKEVHEIRQATS
KKDAEVRRKELVAVISPALIEAVVSAAPALVADPFGCQLVADVLLSAEGDKTAALEAVAA
VAEGDPSAEPMEVEGITTPVHVSRTPYGGRLIKTLIAGGKFNKETGKVEPVEPPLKFADI
LYPVIKDYILDWATGPSSFVVLNMMEAEDFSHASALKKTLKKHKKALEKAATEETAEQKE
SKEAMAQKEREKSEKGAKKGKKGGAKSDKPVGNLGSKLLLEKL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcgaacggcgttaagagaaagagcgcccccgccggcaagggtgcctccgac
gggaagttctcaaagaaggccaaaattgactcgacgaagaaggcggagccggtcgagacc
ctcgagagcgataacgaggacgatttcgacaacgaatctctggactcggatgatggaggc
gttcaattgaatcctcgtgacagggcgcagcaggctcaggccaagggcaagaaggagggt
gccaacggtgccgacaagaacaaggcttttgagagaggccagaactcgagagagtcccac
gccatccagaagaaactggccctcgagcgcaaggccgcgaagcctctcgccgacgagctg
gcacgaaccaagaaaatctgggagaggctgcggaggaagtcccatgtgccgtctgaggag
cggaagcagctggttgacgagctcttcaccatcatcaccggccggatcaaggaatttgtt
atgaagcacgatgccacgcgcgccgttcagactgcccttaagtatgccaccgccgcacaa
cggaaacaaatcacccgtgagctgcagggaacctacactcagctggcggagagccgttac
gccaagttcctcatcgccaaaatggtcgtgcaagccgacggcgagatcaaagacctcatc
atccccgagttctacggcaaggtgcgcaagttgatcaaccaccctgaggcgtcatggatt
ttggacgacatctaccggcaaatcgcgacgaaggagcaaaaggccatccttttgagggaa
tggtacgggcccgagttcgctctcctggagcgtagtaaggacgagaagccgacctcggac
ctggccgagatcctcgagaagaaccccagcaagaagcagcccatcctgaagagcctgcac
gacatgatcaactcgctggtccagaagaagatgaccggcttcaccatgttgcatgacgca
atgctgcaatacttcctaaacatcaaaccaggcaccgaggatttcaacctgttcgttgag
atgatcaaggacgacgaggagggagatctgctgaagaacatggccttcactcgctccggg
tcccggttggtggcgttgctgctggccaacggtacctccaaggaccgtagaaatctgctt
aaggcctacaaggacaacttcgttttgatgtcgggcgatgcttttgcccatatcgtcatc
ctcacagccttcgacgtgattgacgacacaaagatgacatcgaaggccatcttccccgaa
ctcattggcgacggcaaggagacggcaacagataacattgtcgtttctacaacaaatccc
tacgcgagggccacccttctgtacctgttggaggggcagtccagagcactcttccccgcg
aacatgagcgagaacttggccatcctcaaggaggtccacgagatccgccaggcaactagc
aagaaggatgccgaggtgcgaagaaaggagttggttgctgtcatttcaccggcgctgatt
gaggccgtcgtctcggcggcgccggctttggtagcagaccctttcggctgccagctggtt
gcggacgttctactctccgccgagggcgacaagacggccgcccttgaggctgtcgcagcg
gttgccgagggcgacccgagcgcggagcccatggaggtggagggcatcactactcctgtt
cacgtctcccggacaccgtacggaggccggttgatcaagactctcatcgcgggcggcaag
ttcaacaaggagaccggcaaggtcgagcccgttgagccgccattgaagttcgccgacatc
ctgtacccggtcatcaaggactacatcttggattgggcaacagggccgagttcctttgtt
gtgctcaacatgatggaggccgaggactttagccatgcgtccgcgttaaagaagacgctc
aagaagcacaagaaggctctcgagaaggcggcgacggaagagactgccgagcagaaggaa
agcaaggaggccatggcccagaaggagagggaaaagagcgaaaagggagcgaagaagggt
aaaaagggcggtgcgaagtcggacaagcctgtgggcaaccttgggagcaagcttctgttg
gagaagttgtaa
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integrated database retrieval system
