Colletotrichum higginsianum: CH63R_11843
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Entry
CH63R_11843 CDS
T08176
Name
(RefSeq) Prp31 C terminal domain-containing protein
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
chig
Colletotrichum higginsianum
Pathway
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_11843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chig03041
]
CH63R_11843
Spliceosome [BR:
chig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CH63R_11843
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
28870924
NCBI-ProteinID:
XP_018153658
UniProt:
A0A1B7XZG0
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Position
8:2909734..2911671
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AA seq
645 aa
AA seq
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MATLADELLQDFEDSGSEAEDTQQDHDPLGLLDNAPEANGRKSAGDMEVDGDQSEAEDDD
DEMGGVSKGAVDSAEDAEDTKAKVEKMQLGGVDDVRSVAGLMQTLEPVLEVSQILTNTFG
SPEAAFTSSLERTSPDIVVRTVQKIVHYQSQPTPTQLVGNIEDHPEYHLLTQSNSLSTLI
DSEIVLVHKYIRDHYSIRFPELETLITNPLEYAKVVAILGNGPLDSENIKKLQHATENPL
KVSLRSVLDGPSLMIVTVEATTTKGREMSQDELERVYRACEMVISLDKAKKTLTEYVQSR
MNLFAPNLTALIGSLTAAQLLNAAGGLTGLAKTPSCNIPAWGSKKGAGAAGMATNIGIRQ
QGFLYHSPIIQGIPNDLKRQAMRIVAAKLVLAARVDRIHSSPDGSTGEDLKEQCLTRLEK
LTEPPPNKGPRALPAPDDKPSRKRGGRRARKAKEATAMTELRKAQNRMAFGHEEKEVGYG
TGESTAGMGMIGQGNDGRIRNLQIDQRTRAKLSQKNKGWGGATSMNGAASSLKGFGQSVN
SNIDLRGKGLRTSGVGTSLGVGAGTASSLAFTPVQGLELVDPKVQAELSRKRKAEEDRWF
KGGTFTQVAGSSSNGGGGFKKPELPPSKKVDTGAGKMGPPPPRSG
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggccactctagcagacgagcttcttcaggatttcgaggactctggctccgaagctgag
gacactcagcaagaccatgatcctctcggccttctcgacaatgcgcccgaagcgaacggt
cgcaaatccgccggggacatggaggtcgacggcgaccaaagtgaagctgaggacgatgac
gacgagatgggaggtgtctcaaaaggcgctgtcgattctgccgaggacgcagaagatact
aaagccaaggttgagaagatgcaactgggcggcgtcgacgacgtccgcagcgtcgctggc
cttatgcagacccttgaacccgtactagaggttagtcagattcttaccaacacgtttggc
tctcctgaagcagcgtttacatcctctcttgagagaactagtcctgacatcgtggttcga
acggtacagaaaatcgtacactaccagtcacaacctactccaacgcagctcgtcggcaac
atcgaagaccaccccgagtaccacctcctcacgcagtcgaatagtctttctacactcatc
gacagtgagatagttctggtgcacaagtacatccgagatcactactcgatacggtttcca
gagcttgaaacgctcatcacaaacccgctggaatacgccaaggtcgttgcaatcttgggc
aatgggcctttggactcagagaacatcaagaaactgcagcatgcaacggaaaaccctctc
aaggtatcgctgcggtcagtgctcgatggcccatccctgatgattgtaacggtggaagcc
acgacaacaaagggacgggaaatgtcacaggatgaactggagcgcgtgtacagagcatgc
gaaatggtgatatcacttgacaaggcgaagaagaccctcacggagtacgtccagtcacgc
atgaacctgtttgcgccgaacctgaccgctttgatcgggtcattgacggctgcgcaacta
ttgaatgctgctggtggcctcacaggccttgccaaaacgccctcgtgcaacatcccggca
tggggctcgaagaaaggtgctggtgccgcggggatggctacgaacatcggtatcagacaa
caagggttcctctaccactcacctatcattcagggcatccccaacgacctcaagagacag
gccatgcgcattgtggcagccaagcttgtgcttgcggcgcgtgtcgaccgcatacactcc
agcccagacggctcaaccggcgaagacctcaaggagcagtgtcttacacgactcgagaag
ctcacggagcctcctccgaacaagggcccacgagctctgccagcgccggacgacaagccg
tcccgcaaacgcggcggaagaagagcaaggaaggccaaggaggcgacggccatgacagag
ctacgtaaggcacagaacaggatggcctttggccatgaggaaaaggaggtcggctacggt
acaggagagagcaccgcaggcatgggcatgatcggccagggcaatgatggcagaattcgc
aacctgcagatcgaccagcgcacgagggcgaagctcagccagaagaacaaggggtggggc
ggcgcgacgtccatgaacggagccgcatcgtcgctcaaggggttcgggcagtctgtaaac
tccaacattgacctccgcggtaagggcctgaggacatcaggtgtcggcacgtcgctgggc
gtgggagcgggcactgcatcgtcgctagccttcacgcccgtgcagggcctggagctcgtc
gaccccaaggtccaggctgaactcagtcgcaagcggaaggcggaagaggaccggtggttc
aagggtggcacatttacgcaggtggccggctcctcgtccaatggtggaggaggcttcaag
aaacccgagctgccgcccagcaaaaaggttgataccggtgcaggcaagatgggtccgccg
cccccgcgaagcggctga
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