Colletotrichum higginsianum: CH63R_11926
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Entry
CH63R_11926 CDS
T08176
Name
(RefSeq) Chromatin structure-remodeling complex protein RSC2
KO
K11756
chromatin structure-remodeling complex subunit RSC1/2
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_11926
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_11926
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
CH63R_11926
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
CH63R_11926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
Ribosomal_60s
CCD97-like_C
Peptidase_C37
Motif
Other DBs
NCBI-GeneID:
28871007
NCBI-ProteinID:
XP_018153741
UniProt:
H1UUZ2
LinkDB
All DBs
Position
8:complement(3245892..3249900)
Genome browser
AA seq
1087 aa
AA seq
DB search
MATRSDAPEVRESIEAKVSNDVEMVDAPDANAADANQTEATVTAKTGGPERMDVDVDADA
DADGEADADADAEADAEAEADADADADADGEPDDDAASPAESEPGDLLDVIHILNTTLSN
YKDEDGEWWAASFQRIPNKRQLPDYFEIIENPVAFSTIRHKVQKKQYTQFSEFVRDVAQI
CHNAQVYNRPSSAIFKSATIIRDLLKQELQKLIRKGIIKPEEAELPDLGELPPAEDSSPE
AESEEEEEEEEEEEEEEEEEEDDDSEDGGKRRRSKRGGRTSFTKRQLEEAKEEDEHKKRG
RPPKVLTPLEARIHNVIKGLRKVQSDDGGLLIGPFEKLPDKTVNPDYYQVITNPIALDNI
KRKAKRKKYATVDDLVKDMDLMFNNAKEYNEEGSDIYEAAVELQKQAHELASQEKARADD
EFRDEDGKLPLSEIQHNGQTWRVGDWVHIRNVNDMAKPIVAQIFRTWQDRGGQRWINACW
YYRPEQTVHRYEKHFFENEVAKTGQYRDHQIEEVLDRCFVMFVTRFNKGRPRGLPADKEV
YVCESRYNEATCRFNKIKTWTSCVPDEVRERDYEMELFEQPRRLKKVPSPIKHLLQADAK
ETDELPKPTWGAANAPPIIGAVHRRPREANESPPPEPTPSPPPPVAQEAARRPSVLQAMR
QTPSDISMGNPPLTPYGHGMGAAPSPSPAMYAQQQYTPQHASASPVAVPHQTPVPLPQLP
PHQVSHSPQPIRPMFQQHQQQQGFAPSPFQQHQHQQQHPHPQHPQHPQHPQHHPHPQQQQ
HLHHVQHQQQQQHHHQSPTLPTPPPPQYQQHQQLQHHQHQHHQQHQSQSQHQHHHQAQAP
VPQHQHHQPHHQMHPQMMPANPLGPTYNHHSMQPHAPAARTPMASTPNAVQPHNAYNLPR
PPEVFTLPDAINDQIPEEVRSRYNRDEHGRIFFFTTPPVARPEHGLAPENANSGHSLAYL
AKSNPEWLSDRTTRAKAFSVAKQKELKTKMAIDDITQGKTLEELHEWANDSWALYWKSHA
QETSRMREEGDLAEHERLMAEQRRSRVKSRRARDEETERAEATKKANYLDDIYHAHSSLR
SSKPRAA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcgcagcgacgcgcccgaagtgcgcgagtccatcgaggccaaagtcagcaac
gatgtcgagatggttgacgccccggatgccaacgccgccgacgcgaaccaaaccgaggcc
acggtcaccgcgaagacgggcggtccagagagaatggatgtcgatgtcgacgccgatgct
gatgccgacggtgaagcggatgcagacgcagacgctgaggcggatgctgaggccgaggcc
gacgccgacgcggatgccgatgccgatggagaacccgatgacgacgctgcatcacctgca
gaatccgagcctggtgacctactggatgtcatccatatactcaacaccaccctgagcaac
tacaaggacgaagacggagaatggtgggcggctagtttccagcgcatcccgaacaagcgt
cagttgcccgactacttcgagatcatcgagaatcccgtcgccttcagcacaattcgccac
aaggttcagaagaagcaatacacacagttctccgagttcgttcgcgacgttgcccagatc
tgccacaacgcgcaggtgtacaaccgcccttcctccgccatcttcaaaagcgccaccatc
atccgagatctgctcaagcaagagctccagaaacttatcaggaaaggcatcatcaaaccg
gaggaggccgagcttccggatctaggcgagctcccacccgcggaagactcatccccagaa
gccgagtctgaagaggaagaagaggaggaagaagaggaggaggaggaagaagaagaggaa
gaagatgacgactctgaagatggtggaaagcgacgtcgcagtaagaggggtggccggacc
tcgttcaccaagcgccagcttgaagaagccaaggaggaggacgagcataagaagcgaggt
cgtcccccaaaggtcttgacccccctcgaagctcgtattcacaacgtcatcaaaggcttg
cgtaaggttcagtcggacgacggtggcctgctcattggtccctttgagaagttgcccgac
aagacggtgaacccggactactaccaagtcatcaccaacccgattgcgctcgacaacatc
aagaggaaggccaaaaggaagaagtatgcgactgtggacgatctcgtcaaggacatggac
ctcatgttcaacaatgccaaagagtacaacgaagaaggcagtgacatttacgaggctgcc
gtcgaattacaaaagcaagcgcatgagctggcgagccaggagaaggcaagagctgacgac
gaattccgtgatgaggatgggaagctgcccttgtcggagattcagcacaacggccagact
tggcgagtgggcgactgggtgcatatccgcaacgtcaacgacatggccaaacccatcgtg
gcgcagatcttccgtacctggcaggaccgcggcggccagcggtggatcaacgcctgctgg
tactatcgtccagagcagaccgtccacagatacgagaagcacttcttcgagaacgaggtg
gccaagacgggacagtaccgcgaccaccagatcgaggaggtgcttgatcgatgcttcgtc
atgttcgtgacgcggttcaacaagggccggccgcgcgggctcccggcggacaaggaggtg
tacgtgtgcgagtctcggtacaacgaagcgacatgccggttcaacaagatcaagacgtgg
accagctgcgtgccggacgaggtacgcgagagagattacgagatggagctgtttgaacag
ccgcgacggctcaagaaggtgcccagcccgatcaagcatctgctgcaggcagacgcgaag
gagacggacgagctgcctaagccgacctggggcgccgcgaacgcaccgcctatcatcggt
gccgtgcatcggcggcctcgggaagcaaacgaatcgccccctcccgaaccaacaccgtcg
ccaccgccgcctgtggcccaggaagcggcacgacgcccttctgtcctccaggcgatgcgc
cagacgcccagcgacatatcgatgggaaatcctcctcttacgccgtacgggcacggaatg
ggagccgcgccatctccgtcgcccgccatgtacgcgcagcagcagtacacaccccagcat
gcgtcggcatcaccggtcgcggtgcctcaccagacgccggtgcctctaccccaacttcct
cctcaccaagtgtctcattctccgcagcccatccgtcccatgttccagcagcaccagcag
cagcagggattcgcgcctagcccgttccaacaacaccagcatcagcaacaacacccgcac
ccgcagcatccacagcatccacagcatccacagcaccacccccacccgcagcagcagcag
cacttgcaccacgtccagcatcaacagcagcagcagcaccaccaccagtcgcccactctg
ccgacgccgcccccgccccagtatcagcaacaccagcaattacagcaccaccaacaccag
caccaccaacaacaccagtcccagtcccagcaccaacaccaccatcaggcccaagcgccc
gtcccacagcaccaacaccaccaaccacaccaccagatgcatccacaaatgatgccagca
aaccctttgggcccgacctacaatcaccattcaatgcagcctcacgcgcctgcagcgcgc
acacccatggcttcgacacccaacgccgtgcagccgcacaatgcctacaacctgccgcgg
ccccctgaggtgtttacgctgcccgacgccatcaacgaccagatccccgaggaggtacgc
agccgctacaacagggacgagcacggcagaatctttttcttcaccacaccgcccgtcgcc
cgcccggaacatggcctcgcgcctgagaacgccaactcgggccacagcctcgcatacctc
gccaagagcaacccggaatggctgtcggaccgcaccacccgcgccaaagccttttctgtc
gccaagcagaaggagctcaagaccaagatggccatcgacgacatcacccagggcaagact
cttgaggagttgcacgagtgggccaacgattcctgggctctgtactggaagagccatgcg
caggagactagtcgcatgcgcgaggagggcgacctggccgagcacgagcgactaatggcc
gagcagcgccgcagccgagtcaagtccagaagggcacgcgatgaggagacggagagggct
gaagcgaccaagaaggccaactaccttgacgacatttaccatgcccactccagtctgcgg
tcgtccaagccgcgtgctgcgtga
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