Colletotrichum higginsianum: CH63R_12007
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Entry
CH63R_12007 CDS
T08176
Name
(RefSeq) Ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
chig
Colletotrichum higginsianum
Pathway
chig03010
Ribosome
chig04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CH63R_12007
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CH63R_12007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
chig03011
]
CH63R_12007
04121 Ubiquitin system [BR:
chig04121
]
CH63R_12007
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chig04147
]
CH63R_12007
Ribosome [BR:
chig03011
]
Ribosomal proteins
Eukaryotes
Small subunit
CH63R_12007
Archaea
CH63R_12007
Ubiquitin system [BR:
chig04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
CH63R_12007
Exosome [BR:
chig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CH63R_12007
Exosomal proteins of colorectal cancer cells
CH63R_12007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
OTU1_UBXL
Cytochrome_C7
Motif
Other DBs
NCBI-GeneID:
28871088
NCBI-ProteinID:
XP_018153822
UniProt:
H1VYD6
LinkDB
All DBs
Position
8:complement(3492146..3492675)
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AA seq
155 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMAKKRKKKVYTTPKKIKHKRKKTKLAVLKYYKVDSDGKIERLRR
ECPSDTCGAGVFMAAMNDRQYCGRCHLTYVFDKKE
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctcacgggtaagactatcacccttgaggtggagtcttcc
gacaccatcgacaatgtcaagtccaagatccaggacaaggagggcatcccccccgaccag
cagcgcttgatcttcgccggcaagcagctcgaggacggccgcaccctctccgactacaac
atccagaaggagtccaccctccacctggtcctgcgcctgcgtggtggtatggccaagaag
cgcaagaagaaggtctacaccacccccaagaagatcaagcacaagcgcaagaagaccaag
ttggccgtcctcaagtactacaaggtcgactccgatggcaagattgagcgtctccgccgc
gagtgcccctccgacacctgcggtgccggtgttttcatggctgccatgaacgaccgccag
tactgcggccgctgccacctcacctacgtcttcgacaagaaggaataa
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