Colletotrichum higginsianum: CH63R_12099
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Entry
CH63R_12099 CDS
T08176
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
chig
Colletotrichum higginsianum
Pathway
chig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CH63R_12099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_12099
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CH63R_12099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
NRDE-2
Suf
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
28871180
NCBI-ProteinID:
XP_018153914
UniProt:
A0A1B7Y065
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Position
8:3766783..3768109
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AA seq
403 aa
AA seq
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MSVAEKARFYLERSVPQLREWEEKEIFTKDEIRTIVQKRSDFEHRILAPRSKPDDFSAYA
KWEHSLETLRAKRCKRMKIGHVVSQHTSQARVLAIYERAVSRHPGRKDLWLEYLAYTADV
KATKRWRRTMAAALRMMPTDADLWVFAGRRSASNGDMGGARGYFMRGCRFCTTEGTLWIE
YARCEMEWLAKMEAKKGGAGKKKAEQENPLAGEKMDDDDEIKFHDQDDDDDEQDEDDALR
LPVPAKDKAALNEEDSKALKNNPALDGAIPTAIFDISRKQPFFSPETAERFFDMFAAFAS
KVSSAAKIVAHVVDAMREQDAAHPAAWNCHIRLPLVGVSLDTPQFPLGLREVLSRLGRGL
DETSDAEALRSKSLVWIELILLVKDLDEGIRAVLEHTKDKLQS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgccgagaaggcccgcttctacttggagcgctccgttccccaattgcgcgaa
tgggaggagaaggagatcttcacaaaggatgagatccgcaccatcgtccagaagcgcagc
gacttcgagcaccgcatcctcgccccccgctccaaacccgacgacttcagcgcctacgcc
aagtgggagcactccctcgagaccctccgcgccaagcgctgcaagcgcatgaagatcggc
cacgtcgtctcccagcacacgagccaggcgcgcgtcctcgccatctacgagcgcgccgtc
agcaggcaccccgggcgcaaggacctttggctcgagtacctcgcctacacggccgatgtc
aaggccacgaagcgctggcgccgcaccatggccgccgccctgcgcatgatgcccaccgac
gccgacctctgggtctttgccggccgccgctccgcctccaacggcgacatgggcggcgcg
cggggctacttcatgcgcggctgccgcttctgcacgaccgagggcaccctgtggatcgag
tacgcccgctgcgagatggagtggctggccaagatggaggccaagaagggcggcgcgggc
aagaagaaggccgagcaggagaacccgctcgccggcgagaagatggacgacgacgacgag
atcaagttccacgaccaggacgacgacgacgacgagcaagacgaggacgacgcgctgagg
ctgccggtgccggccaaggacaaggcggcgctgaacgaggaggacagcaaggcgctcaag
aacaacccggccctcgacggcgccataccgacggccatcttcgacatctcgcggaagcag
cccttcttcagcccggagaccgccgagcgcttctttgacatgttcgccgccttcgccagc
aaggtctcgtccgcagccaagatcgtcgcgcacgtcgtcgacgcgatgcgcgagcaggac
gccgcccacccggcggcgtggaactgccacatccgcctgccccttgtcggcgtcagcctg
gacacgccgcagttcccgcttggcctgcgcgaggtgctgtcgcgcctgggccgcggcctg
gacgagacgtcggacgcggaggctttgcggagcaagtctctggtgtggatcgagctgatc
ctgctcgtcaaggacctcgacgagggcatcagggccgtgctggagcatacgaaggacaag
ttgcagtcatag
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