Colletotrichum higginsianum: CH63R_12113
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Entry
CH63R_12113 CDS
T08176
Name
(RefSeq) Arid/bright DNA binding domain-containing protein
KO
K11771
SWI/SNF chromatin-remodeling complex subunit SWI1
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_12113
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_12113
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
CH63R_12113
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
CH63R_12113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
28871194
NCBI-ProteinID:
XP_018153928
UniProt:
H1V5Q1
LinkDB
All DBs
Position
8:3809207..3812548
Genome browser
AA seq
1113 aa
AA seq
DB search
MSTWMNEAAVPNHNGNAFPHMNDSNAAGAMMDPSAFMGSPAHFNPAQFANPQQAQQAQQQ
QVQHHQQQQQQQQQQQMAAMQNGQMRNASPSSFQNPAYQTNSVVPSKRPRPREDSIAGSP
RQNPGMLPTSRSETPQTFPGYQPGMPQQAQGQPSPYPHLQPNGSANATPSPIMANQLRPG
SVPQRVATASPHPFSPGAQQFAPQASPNPSEHGTPQPNHYMQQNMQNMPQGYNPNFNPSQ
SPARPSPNPNAMAASGMMPQQMGQMPQHMGQMPNQMLPPNMQPRNPMEQQQMAAYQARLA
KQLQQGTMQGMQNMQNMQNMQSMQNMQMAAQMQAQNMAQGRGMMPKQPMQMPNGQMQPGA
MRPQPQQRPMPGSNPESFMKSLNNFMAAKGQQLDPNPVIGNRPVNLLTLFQSVQSKGGYK
PTTAGNQWPHVSNSIGFHPGQIPQAPQMLKEIYERNLLRFEEAWVAQQSRQRMMQHHNQP
GMPGQPGQPGQPGPPIPPGAQPQSTPTKQQMSPQGHLPPQQPMMPQSQPNMPPQQVQTPV
KQGSFSGQPPSVNGFQTPQAPGPHTPATAQQGHARNSLSRSVEPTPGHPQVFPSASPASV
KGGGMPMAAPPGMDQNPMAASIKPRMLRLAHESDEYTPSARPLETYGGINVRAFDLKGLE
LQSLKPDIPPPYELGYVDLHALTRSLESGIHGEVRLALDTLATVTATQHQALHIHLKYCE
ELIEALLECAEEQLDLLVENTEEASADIQLAPYEDVARACWTDKMGVRELPKFGSLDYEL
DRAVERFSCVITILRNLSFPEASNENHLVLGDELVIKFLCVVIRYLGTRNMLFRTNANTL
EFMKDAIILLSNIAGAVEIPGREQALCLLHFLLAFAPAPGPTTMDDKLYFPPYQPGVHTY
TFHAVDALARFLARDEPNRTHYKMLYSMDASSSPPYDLLTRSFALATTVVPIQSPESAVA
HIEAPERFFRLVEDRKPWLMQGLLAADILASLAPGYETGVAKSWLSSGNGFAQALYHFVQ
VLGAQFEQPWQTRSGQGDPAGRDTGLVYIATSGISTLRRLAEKSRDPNDPRSSVPADSLP
SEESLFKMMLMRSPDWTKDGVIRNLAVYASVDS
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctggatgaacgaagccgcggtccccaaccacaatggcaacgccttcccacac
atgaacgactcgaacgctgccggagccatgatggatccctccgccttcatgggcagccct
gcccacttcaatcccgctcagtttgccaatcctcaacaggcccagcaggcccagcaacag
caggttcagcatcaccagcagcagcagcaacagcagcagcagcagcagatggccgccatg
caaaatggccagatgcgcaacgcatcgccctcatccttccagaaccccgcctatcaaacc
aactcagtcgttccatcaaagcgacctcgtcctcgcgaggacagcatcgccggctcgccg
cgacagaatcccggcatgctgccgacgtcgcgctccgaaacgccccagaccttccccggc
tatcaacccggtatgcctcaacaggctcaaggacaaccctcgccctacccccatctccaa
cccaatggctccgccaacgcgacgccgtctcccatcatggcgaaccaactgcgacccggc
agtgtacctcagcgagtcgcaaccgcgtcaccgcatcccttctcgcccggcgcccagcag
ttcgcgccccaagcctccccgaacccttccgaacacggcaccccccaaccgaaccactat
atgcagcagaacatgcagaatatgccacagggctataatcccaacttcaacccttcccag
tcgcccgcgcgaccctctccgaacccaaacgcgatggccgcctcgggcatgatgcctcag
cagatgggacagatgcctcagcatatgggccagatgccgaaccagatgttgcctcccaat
atgcaaccacgaaacccgatggagcagcaacagatggctgcctaccaggcgaggttggct
aaacaacttcaacaagggacgatgcagggaatgcagaacatgcagaacatgcaaaatatg
caaagcatgcagaatatgcagatggcggcgcagatgcaggctcagaacatggctcaaggc
cgcggcatgatgccaaagcaaccgatgcagatgcccaacggccagatgcagccaggcgcc
atgcgaccccagccccaacaacgcccgatgcccggatcgaaccccgaatccttcatgaag
tctctcaacaacttcatggccgccaagggccaacaactcgaccccaatccggttattggt
aaccgccccgtcaatctccttacgctcttccaatccgtacaatcgaaaggaggctacaag
cccacgaccgccggcaatcaatggcctcatgtttccaacagcataggcttccaccccggc
cagattcctcaggcgccacagatgttgaaggaaatctacgaacggaacctgcttcgcttc
gaagaggcctgggtcgcgcagcagagccggcagcgtatgatgcagcatcacaaccagcca
ggcatgccgggccagcccggtcaacccggtcagcccggtccacctattccgcccggtgcc
caacctcagtcgactcctacgaagcagcaaatgtccccgcaaggtcatttgccgccccag
cagccaatgatgcctcagagtcagccgaacatgcctcctcagcaggtccagactcccgtc
aagcaggggtcattcagcggccagcctccgtcggtcaacgggttccaaactcctcaagca
ccagggccacatactcccgcgactgcgcagcagggccacgcccgcaatagcctttcgcgg
agcgtcgagccaacgccaggccatcctcaggttttcccctcagcgtccccagcatccgtc
aaaggtggagggatgcccatggccgcgcctcctgggatggaccaaaacccgatggcggcg
tctatcaaaccccgcatgctgcgactggcccacgaatccgacgaatacacgccgagcgct
cgccctctcgagacctacggcggaatcaacgtccgggcatttgacttgaagggtctggaa
ctccaaagcctgaaacctgacattcccccaccgtacgagctggggtatgtagatttgcat
gccctcacgcggagcttagaatccggcattcacggcgaagtccgccttgccctcgacacc
cttgcgaccgttacggcgacccagcatcaggcgctgcacatccacctgaagtactgcgag
gaactcattgaagcgcttctcgagtgtgccgaagaacagctggacttgcttgtggagaac
acagaagaggcttcggccgacatccagctggccccctacgaggacgtggcacgcgcctgc
tggaccgacaagatgggtgttagggagctgcccaagttcgggtcgctagattacgagctc
gaccgagctgttgagcgcttctcctgcgtcatcaccattctgcgcaacctgtcctttcct
gaagcctccaacgagaaccatcttgtactgggcgatgagctagtgattaagttcctttgc
gtcgtcatcaggtatctcggcacccggaacatgctgttccggacaaacgcaaacacgctg
gagtttatgaaggacgccatcatcctcctgtccaacattgcgggcgcggttgagattccc
ggccgcgagcaggctttgtgtcttttgcacttcttgctggcttttgcgccagcaccaggg
ccaacaaccatggacgacaagctctacttcccgccctatcagcctggtgtccacacgtac
actttccacgccgtagacgcgctggccagatttctggccagagacgagcccaacagaacg
cactacaagatgctgtattctatggatgctagcagcagtccgccgtacgacttgttgacg
cgttcttttgctctcgctacgaccgtcgttcccatccagtcgcccgaatccgccgtggca
cacatcgaggctccagaacggttcttccggctcgtcgaggatcgcaagccgtggttgatg
cagggcctcctggctgcggatatcctcgcctccctggctccagggtacgaaacaggcgtt
gccaaatcatggctttccagcggcaacgggtttgcgcaagccctgtatcattttgtgcag
gtgctgggagcccagttcgagcagccgtggcaaacacgtagcggccaaggtgatcccgcg
ggtcgtgacacggggctggtatatattgcgacgtcgggtatctcgactctgcggagacta
gcagaaaagtcccgcgatcccaacgaccccaggtcgtctgtaccagcggattcgttgcct
tcggaggaaagcctattcaagatgatgctgatgcggtcgccagactggaccaaggatggc
gtgatccggaaccttgcggtttacgcgtcagtggactcttga
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