Colletotrichum higginsianum: CH63R_12231
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Entry
CH63R_12231 CDS
T08176
Name
(RefSeq) Polysaccharide lyase family 3
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_12231
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CH63R_12231
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GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
28871312
NCBI-ProteinID:
XP_018154046
UniProt:
A0A1B7Y0I5
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Position
8:4238778..4239678
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AA seq
230 aa
AA seq
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MRTEAFKLLATLAVAFPTVSACVGKDALPSATETISNSEPIEVAAGESYDGKLARFDRGS
GACKAQTEGGQKDAVFILRKGATLKNAIIGKDQMEGVYCLGGGCTIENVWFEDVCEDAIS
IKEDEAGTETRIIGGGAYKASDKVVQHNGCGSVSISNFYAEDYGKVYRACGTCDACKRTV
TIEGVSAYGGGEIAGINEETGDEATLVNICTDAKTPCQLYDGPGTKSGTC
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccgaagccttcaagctcctcgcgaccctcgccgttgccttccccaccgtgtcc
gcctgcgtcggcaaggacgctctcccctccgccaccgagaccatcagcaactcggagccc
atcgaggtcgctgccggcgagtcgtacgacggaaagctggcccgcttcgaccgtggctcc
ggcgcctgcaaggcccagaccgagggcggtcagaaggacgccgttttcatcctgcgcaag
ggcgccaccctgaagaacgccatcatcggaaaggaccagatggagggcgtctactgcctc
ggcggtggctgcaccatcgaaaacgtctggttcgaggacgtctgtgaggacgccatctca
atcaaggaggacgaggctggcaccgagacccgtatcatcggcggtggtgcgtacaaggct
tccgacaaggtcgtccaacacaacggctgcggtagcgtcagcatctccaacttctacgcc
gaggactacggcaaggtctacagagcttgcggcacgtgcgacgcttgcaagcgcaccgtc
accatcgagggcgtctctgcctacggcggcggcgagatcgccggcatcaacgaggagacg
ggcgacgaggccactctcgtcaacatctgcaccgatgccaagaccccgtgccagctctac
gacggccctggcaccaagtccggtacttgctaa
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