Colletotrichum higginsianum: CH63R_12311
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Entry
CH63R_12311 CDS
T08176
Name
(RefSeq) Vacuolar protein sorting-associated protein vps13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_12311
Membrane trafficking [BR:
chig04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
CH63R_12311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
Motif
Other DBs
NCBI-GeneID:
28871392
NCBI-ProteinID:
XP_018151702
UniProt:
A0A1B7XTY3
LinkDB
All DBs
Position
9:complement(126486..136225)
Genome browser
AA seq
3226 aa
AA seq
DB search
MLEGLVAGLLNRFLGMYVKNFDPAQLKVGIWSGDVKLRNLELRREALDQLKLPINVMEGH
LGELTIIIPWSNLRGAPVKVFIEDVFLLASPREEAAYDEEEEDRRKQRIKMEKLDSAELL
KERSQEGMSQEEQQKSQSFTQSLVTKIVDNLQVTVKNIHVRYEDAISAPGHPFALGVTLQ
EFSAISTDGQWKPTFIQDSAKSTHKLATLGALAVYWNTDTELLGPGREVDTDEKPPMPHA
EMVDRFKRLIGSTQDTELNHQYILRPVNGKAKIVLDKTGDVRVPKAKASLLFEEIGLVID
DDQYRDGLMMVDLFHYFIRHQEYKKFQPKGVTPKEDPRAWLKFAGDAVLSKIHDRNRRWS
WDYFRERRDDRKRYIELFKKRKQQQQLNAQENEDLNKLEFKLDYEDLRFWRSLARNQLKK
ENAAALKNQPPKQQQQGWLAWAWGGGQKHQEQHAQDDENTQITEEQRKELYDAIEFDEKT
ALAESVDIPRDSVKMQVEAWLSTGSFTLKKSHNGKRSDLLSLHFDVFKAKVLQRPDSFLA
DLSLGGLRVNDGTTPDTLFPEIVRVKDAPEIHDQKRLTIEELEENDDEPFFRFEVEQNPI
DREGDIALSGSLKPLEIVWNPNFVVGVADFFRPPERHMESITALMETAGATVETFREQTR
AGLEFALEEHKTINAQLDLQAPLIIVPVSISVKDSTCLILDAGHISVNSELVDNDTMKQI
QSKQRQSYTDEDFKRLESVMYDKFLVKLSSTQVLIGPSIDVTKAQLSKKDDTQHLHVVEE
INVDFVVETSILPKAPNLTKLKVSGHLPMLHATVSDSKYKSLMRIIDVAIPKFGQDQPQE
QINDSQRQAVATRPRGLSTASSRSRSRKEPSRRRSSQFPFMQSQTAIVIDEDDEDDEFED
ADGGRDNKDQLKLQQRSFELKFKVDTLKGSLYRSDPDRKKPDQLLVELVAEKFDLLFYLR
PYDMNAEVSLGSVTMDDFVDNPSADFKSIVSSGDVEDREQNRSLVSVKFTRVNRLSPEFM
PVYEGVETNVTAAISTINLIVTRKTLLTLLDFILATFTGNNNDASRPQGQRAISDSDSED
DDEFEIAVDAPPEDTPANAGSIRVKVDLKSIRMILNNDGIRLATLSFNHADVGVFLLGKT
MRVNAKLGNLNLVDDINQGVSEDSNLRQLISIQGDELADFRYETFDATNKKAYPGYDSSI
YLRAGSVKLNFLEEPFRKIIQFLVKFGKMQAIYNAARQAAASQANQIQQSTSKLKYDVVV
KTPIVVFPRVIAQGQPKRDVITAYLGEIYAQNKFAPLDDSENSQIATKISAGIRNIRLTS
DFEYHGDLSEELELIDKVDLGFNVTYAEHQNGTKRPELEIEGSMSDFNLRLTQFQLRFLM
EISKAVPAAFAADSEDQDQDAEREVDKDTLQRAKSMPTDNNSLGDNDAAVDLGPELSPKD
QTWTKLDLVFQVNIIGMELLLAPEEKPVGKLENASLSRFSLDGTKLKTRMLNDGSLEGEF
LIHSFTIYDSRSRDANKFRRIMTSSNKEVQQLMASITMSGGQERSLIAIVTVDSPRIIFA
LDYLFAIQNFVMVGLQPQDPSPGDEESLLETPEESDVDADSMQVTWSNKAKSQKSSITKE
TEGQQGDTDDKPQSTMSISYRVNIVDAQVILIANPLSTSSEAIVLGTKQVLLSQQHALTF
QVSEIGMFLCRMDRFEDSRLRIIDDFSVQMSMDSSKPNMTSIHADIEPLILRLSLRDILL
ALQIASKATELSDQQQKEQDNKKSASAADERAKQLRQSGLKQRTASGKGPSTMANKTVMS
KTARVSASQAKQDLEEQHGTAVQVQPKRREELSATIEGIRVVLIGDVHELPILDLGIKSF
TATAEDWSSNLKAETAIDLYTNVYNFSKSAWEPLLEPWQVGFGIAREQQSGLLSIDVASK
KIFDVTITTATIALASKSFAFLSKDEDVLGKPRGVDAPYRIRNYTGFDVVVQSKSTTTDD
NMTARLEEGEEAPWSFEPWEKMRENLSTEGSSGSVSIHLEGSGFDAVKNVRLNREGEAIY
SLKPKTDNILHRLLVEVTMGKDNVKYVTFRSPLVVDNLTQIPVELGVYDAQEGHLLKIEK
IAPGESRPAPVGAVFLKSLLVRPDSGFGYAWSSESLWWRDLLKRPTRTMVCKGENGDPFY
FQLNATFDRSNPLTKNYPYMRIKLSPPVILENLLPYDFKYRIYDKNTKKDWANFLRKGGL
SPVHVVELSHLLLLSVDMQDTVFKPSDFAIINSGSSDDFKKEDRLLCKDADGLQLNLKLH
YHKVPDGGGAFRVTVYSPYIILNKTGLDLQMRAKGFLQGARPAAGQSTLSNRSRSDRDRP
KATPFMFSYGNDDHRNRALLQIADSEWSKPQSFDAIGSTAEVVLPSPSRNTEVHIGITTE
AGEGKYKMTKVVTLAPRFVLENKLGEEINVRESSSSGFMTLKPGAHQPLHFMQKTAVKQL
SLCHPGMNNQWTSPFNISDIGTTHVKIAKAGQRQRLIRVETLMEGATIFLHLSLETKNWP
YQMRNESDTEFTFYQANPSLDDDGVEDRSGWRPIKYRLPARSIMPYAWDFPAAKFREIII
NAHGKERHVKLAEIGNQIPMKFATTSGQQKIIDINVAADGPTQTLILSNFRQSKSLYRQK
SKSGSRTSTDGFEVKDQETTATFRAQLKLSGIGVSLINSQLKELAYVTFRDVSLRYHDSP
LQQTISFSVKWIQIDNQLYGGLFPMILYPSVVPKRAQEVDAHPSIHAMVTRVKDDSYGVL
YIKYATLLMQQMTIELDEDFVYAVLDFSNIPGAAWSDTNEEGKLCDEELDIPEPQQQQSG
QDIYFELLNIQPMQLDLSFMRTERVNAEDKTSSRNPLMFFLNVMTMAIGNVNDAPIRLNA
LMLDNVRVSVPALTQNISSHYSQEVLYQIHKILGSADFLGNPVGLFNNISSGLTDVFYEP
YQGLILSDKPEDFGLGVAKGAASLVKKSVYGFSDSFSKFTGSLSKGLAAATLDKQFQDRR
RITRARNRPKHALYGVTTGANSLFTSAASGVGGLVRKPLEGAEQEGALGFFKGIGKGVVG
FATKPAIGVLDMASNVSEGIRNTTTVFDGSELDRVRPARFVPSDGIVRPYNAREALGQSW
LKQVDNGKYFNEDYIAHLELPREDMVVMVTYARILLIRSRRLTSEWDVPLKDVQTIAKER
TGLSLTLRGGTNGPFIPVGDESGRGFLYKMVAVAVEEFNRRFRGME
NT seq
9681 nt
NT seq
+upstream
nt +downstream
nt
atgttggagggactcgtcgccggcctgctcaacaggtttctgggcatgtacgtcaagaat
ttcgacccagcacagctcaaggtgggaatctggtcgggcgatgtcaagctccggaacctc
gagctccgccgggaagccctcgaccagctcaagctgcccatcaacgtcatggaaggccac
ctgggcgagctcaccatcatcattccctggtccaacttgcgtggcgcccctgtcaaggtc
ttcatcgaggatgttttcctcttggcctcgcctagggaggaagctgcctacgatgaagaa
gaggaggatcggaggaaacaacgcatcaagatggagaagctcgactcggccgagctgctc
aaggagaggtctcaagagggtatgagccaggaagaacagcagaagagccagagcttcacc
cagagtctggtcaccaagatcgtcgacaacctgcaggtcacagtcaagaacatccacgtc
agatacgaggacgctatctccgcccccggtcacccctttgccctcggcgtcaccctccaa
gagttcagcgcaatcagtaccgacggccagtggaagcccacgttcatccaggactcggca
aagagcacccacaagctcgccacccttggcgcccttgctgtctactggaacacggatacc
gagctgctgggccccggacgagaggtcgacacggacgagaagcctcccatgccccatgcc
gagatggtggacagattcaagaggttgatcggctcaactcaagacacggagctcaaccac
caatacatcctgcgccccgtcaacggaaaggcaaagattgtcctcgacaagaccggggac
gtccgtgttcccaaagccaaggcaagcttgctgttcgaagagatcggcctggtcatcgat
gacgaccaatatcgcgatggcctaatgatggttgatcttttccactacttcatccgtcac
caagaatataaaaagttccagcccaagggagtcacgcccaaagaagaccccagggcttgg
ctcaaattcgccggtgacgcagtgctcagcaagattcacgacagaaaccgaagatggtcc
tgggactattttcgggagcgacgtgacgaccgcaaacgctacattgagctcttcaagaag
cgaaagcagcagcagcaactcaacgctcaagaaaatgaagacttgaataagcttgagttc
aagctcgactacgaggatctgcgcttctggcggtcgctggcccgcaaccagctgaagaag
gagaacgccgcggcattaaagaaccagccacctaagcagcagcagcaaggctggctggca
tgggcttggggcggtggccagaagcatcaagaacagcatgcccaagacgacgagaatacg
cagatcaccgaggagcagcgcaaagagctgtatgacgccatcgagtttgacgagaagacc
gccctggccgaatcagtcgacattccccgtgactccgtcaagatgcaggtcgaagcgtgg
ctgagcaccggaagcttcacgttaaaaaagagccacaacggcaagcgaagcgaccttctc
agtcttcactttgacgtcttcaaagccaaggtcctacagcgtcccgattccttcctcgcc
gatctcagcctcggcggtctccgtgtcaacgatggaacaacgcccgacacccttttcccc
gaaattgtcagggttaaagatgcgcctgagatccacgaccagaagcgtctcaccatcgag
gaacttgaagagaatgacgacgagccatttttccgcttcgaggttgagcagaatcccatt
gaccgcgaaggagacattgccctcagcggatccctcaagccgctggagattgtgtggaac
ccgaacttcgtggtgggcgttgcagacttcttccggccaccggaacgacacatggaatcc
atcacagccttgatggaaacggctggggctaccgtcgagaccttcagagagcagacacgc
gccggcctcgagttcgcactcgaggagcacaaaaccatcaacgctcagcttgacttgcag
gctccgctcatcatcgtgccagtcagcatttccgtcaaggactcgacttgcctgattctg
gatgccggccacatcagcgtcaatagcgagctggtcgataacgacaccatgaagcagatc
cagtccaagcaacggcaatcgtataccgatgaggatttcaagcgtctcgagtctgtcatg
tacgacaagttcttggtgaagctctcttcgacccaggtgctgataggcccatccatcgac
gtgacgaaagctcaactttcaaagaaggatgacacgcaacatctccacgtggtagaagag
atcaacgtcgacttcgtcgtcgaaacgtccatcttgcccaaggcaccgaatctgacaaag
ctaaaggtctccggccacctccccatgctccatgctaccgtctcggattcgaagtataag
agcttgatgcgaatcatcgacgtagccatccccaagtttggccaggatcaaccacaagaa
cagatcaatgactcccagcgacaggcagtggcaactcgtccgcgtggcttgagcaccgcc
tcgagcaggtcgcggtcacgcaaggagcccagccgtcgtagatcatcacaattccccttc
atgcagtcgcagaccgccatcgtcattgacgaagatgacgaggacgacgagttcgaggac
gccgacggcggtagggacaacaaagaccagcttaagctgcagcagcgttcttttgagctc
aagttcaaggtggacactctcaaggggtccctgtaccggagcgacccggacaggaaaaag
cctgatcaattgctcgttgaattggtggcggaaaagttcgaccttcttttctatctgcgc
ccgtacgacatgaatgccgaggtctcgctgggctccgttaccatggacgacttcgtcgac
aacccatcagccgacttcaagtccatcgtgtcgtccggcgatgtcgaggatcgtgagcag
aatcgcagccttgtcagtgtcaagtttacccgtgtcaaccgcttgtcgccagagttcatg
cccgtgtacgaaggcgtggagacaaatgtcactgctgctatctccacaatcaacctcatt
gtgacgagaaagacgcttctcacccttctggatttcatcctggcaacttttactggcaac
aataacgatgcctcgaggccacaggggcaaagggccatctcggactcggactcggaggac
gacgacgagttcgagatagcagtcgacgccccgccagaagacactccagccaatgccggg
tccatcagagtcaaggtagacttgaaaagtatccggatgattctcaataacgacgggatc
cgtttggctacattgtcattcaaccatgctgatgtcggagtcttccttttgggcaagaca
atgcgagtcaacgccaagctgggtaatctcaacctggtcgacgacatcaaccagggtgtc
tcggaggattccaatttgaggcaactcatttccatccaaggtgacgaactcgccgacttt
cggtatgagacgttcgatgctaccaacaagaaggcatatcctggatacgactcttccatt
taccttagggctggctccgttaagcttaacttcctcgaggagcctttccgaaagattatc
cagttccttgtcaagttcggcaagatgcaggccatatacaacgctgctcgccaagcagct
gcctcgcaagccaaccaaatccaacagagcacgagcaaactcaagtatgatgtcgtagtc
aagacgccaatcgttgttttccccagggtgatcgcccagggacagcccaagcgggatgtc
attactgcttacttgggagaaatctacgcccagaacaagttcgctccgttagacgattcc
gagaactctcagatagcgacgaagatttctgcaggaatccgcaacatccgcctgacgtcc
gacttcgaatatcatggcgacctttccgaggagttggagctcatcgacaaggtagacctg
ggcttcaacgtcacgtatgccgagcaccagaatggcacgaagcgccctgagcttgagatt
gaaggcagcatgtccgacttcaacctgcgactcacccagtttcaactcagatttctgatg
gagatctccaaggctgtgcccgctgcattcgcggccgactcggaggaccaagatcaggac
gccgaacgggaagtcgacaaagatacgctgcaaagggccaagtcaatgcccaccgacaac
aacagtctgggcgacaatgatgcagcagttgatcttggacctgagctatcaccaaaggac
caaacatggacgaagcttgaccttgtcttccaggttaacatcattgggatggagctcttg
ctggctcccgaggagaagcccgttggcaagctcgagaatgctagcttgtcccggttctct
ttggacggcaccaagctgaaaacacgcatgctcaacgatgggtctctcgagggcgagttc
ctgatccactcgtttaccatttacgacagccgctctcgcgacgcaaacaagttccggcgg
atcatgacgtcctccaacaaggaggtccagcagctgatggccagcatcacaatgtccgga
ggccaggagaggagcctcattgccatcgtcaccgtcgacagcccgcgcatcatcttcgcg
ctcgactacttgttcgctatccaaaatttcgtcatggttgggttacagccccaggatccc
tcgccaggagatgaggagtcgctgctggagacgccggaggaatcggatgtggatgcggat
tctatgcaggtcacctggtccaacaaagccaagtcccagaagagcagtatcaccaaggag
accgaagggcaacagggtgacaccgacgataagccccagagcaccatgagcatttcgtat
agggttaatatcgtggatgcgcaggtcattttgatcgcgaaccccctcagcaccagctct
gaggccatcgtgctcggcacgaagcaggtcttgctctcccaacagcacgcactcaccttt
caagtatctgagattggcatgttcctctgccgcatggatcggttcgaagactcacgcctc
cgcatcatcgacgacttttccgtccagatgtcgatggacagctcgaagcccaatatgacg
agcatccatgcagacatcgagcccttgatactgcgactttctcttcgggacatcctcctt
gctctgcaaatcgccagcaaggctacggagctgtcagaccaacaacaaaaggagcaggat
aacaagaagtcggcctctgccgcagacgaaagagccaagcaactgcgtcaatctggtctc
aagcagcgaactgccagcggcaagggaccatcgaccatggcgaacaagacggtcatgtcc
aagactgctagggtgtcagcatctcaggcgaaacaagatctagaagagcagcatggcacg
gcggtccaggttcagccaaaacgtcgcgaggaactctcggccaccattgaaggcatccgt
gtggttcttattggcgatgtacacgagcttcccattctcgatctgggcatcaagagcttt
accgccacggcggaggattggtcctccaacctcaaggccgagacagccatcgacctctac
accaacgtctacaacttctccaagtcagcctgggagcccctgctcgagccctggcaggtc
ggcttcgggattgcgcgggagcagcagtcgggtctattatccatcgatgtcgcctcaaaa
aagattttcgatgtcacgatcacgacggccaccatcgcgctggcgtccaagtctttcgcc
ttcctcagcaaagacgaggatgttcttggcaaaccgcgcggtgttgatgccccctaccgc
atccggaactacaccgggttcgatgttgtggtgcagtccaagagcacgacgacagacgac
aacatgacggcccgtctcgaagagggagaagaagctccctggagcttcgagccgtgggag
aagatgcgggagaacctttccactgaaggtagcagcggcagtgtgagcatccatctggag
ggcagcgggtttgatgccgtgaaaaatgtcaggctgaaccgcgagggcgaggcgatctat
agcctgaagcccaagaccgataacattctgcatcggttgcttgtggaggtcaccatgggc
aaggataacgtcaaatatgtcacgttccggtcgcctctcgtggtggacaacctgacccag
attcccgtcgagctcggcgtctacgatgctcaggagggccacctgctcaagatcgagaag
attgcccccggagaaagccgacctgctccggtgggtgctgtgtttttgaagtccctcctg
gtgcggcccgactcgggcttcgggtatgcgtggtcttcggagagtctgtggtggagggat
cttctgaagcgacctacacgcacgatggtctgcaagggagaaaacggtgatccgttctac
ttccagctcaacgcaacgtttgacaggtcgaacccattgaccaaaaactacccttacatg
cgtatcaagctgtcgccgccggtgatccttgagaacctgcttccttacgacttcaagtac
cgcatctacgacaagaacacgaagaaggactgggccaacttcctccgcaagggtggtctt
agtccagttcacgtcgtggagctgtctcacctgcttctcctcagtgtcgacatgcaggac
accgtcttcaagccgagcgactttgccattatcaactctggatcgtcagatgacttcaag
aaggaggaccgactcctctgcaaagatgcagacggtctgcagctcaatctcaagcttcac
taccacaaggtcccggatggcggaggggccttccgggtgacggtctacagcccctacatc
atcttgaacaaaaccggcctcgaccttcagatgagagccaaaggcttcctgcagggcgcg
cggcctgcagctggccagtcaactctgtccaacaggtcgaggtccgacagggaccgcccc
aaggcaacgccgttcatgttctcctacggcaacgacgatcacagaaacagagcactgctg
cagattgccgactctgaatggagcaaaccgcaaagctttgacgctatcggtagcacggca
gaggtggtgctgccgtcgccttccaggaacaccgaggtgcacatcggcatcacgaccgag
gctggagagggcaagtacaagatgaccaaggtcgtcactctggcgccgaggttcgtcctg
gaaaacaagcttggggaagagatcaacgtccgagagtccagctcgtcgggcttcatgacg
ctgaagccgggcgcgcatcagccacttcacttcatgcaaaagacggccgtaaagcagctc
tcgctttgccatcctggaatgaacaaccagtggacttctcccttcaacatatcggacatt
ggcacgactcacgtcaagattgccaaggcgggtcaacgccaacggctgattcgcgtcgag
actctgatggagggcgcaacgattttcctgcatcttagcctggagaccaagaactggccg
tatcagatgaggaacgagagtgacacagaattcaccttctaccaggccaatcccagcctg
gatgacgatggagtcgaggacagatccggctggcgacccatcaagtacaggctgccggcg
agaagcatcatgccctatgcctgggacttccccgccgccaagttccgcgagatcatcatc
aacgcccatggcaaggagcgacatgtcaaacttgccgagattggaaaccagattccgatg
aagtttgccaccacctccggccaacagaagatcatcgacatcaacgttgccgccgacggc
cccacgcagactctgatcctatccaacttccgtcagtccaagagtctgtatcggcagaag
tccaagtctggatcccgtacaagcaccgacggcttcgaagtcaaggaccaggagacgact
gcgaccttccgggcgcagctgaagctctcgggcatcggagtctctctcatcaactcccag
ctcaaggaactggcctacgtcaccttcagggacgtctcgctccggtaccacgactctcct
ctgcaacagaccattagcttctcggtcaagtggatccaaatcgacaaccagctgtacggt
ggtcttttcccgatgatcttgtaccccagcgtggtcccgaagagggcccaggaggtcgac
gcacacccttcgatccacgccatggtcacccgggtgaaggacgactcgtacggcgtgctc
tacatcaagtacgccacgctcttgatgcagcaaatgacaatcgagttggacgaggatttt
gtctacgccgtcttggacttttccaacatccctggagccgcctggtccgacaccaacgaa
gaaggcaagctgtgcgacgaagagctggacattcccgagccgcagcagcagcagtcgggt
caggacatctactttgagttgctcaacatccagcccatgcaactagatctatccttcatg
cgcacggaacgagtcaatgccgaggacaagacatcgtcgcgaaaccctctcatgttcttc
ctcaacgtcatgacgatggccatcggcaacgtcaacgatgcgcccatccgtctcaacgcc
ctcatgctagacaacgtccgcgtgtccgtgcccgccttgacacagaacatttcgagccat
tacagtcaggaagtcctataccagatccacaagatcctcggctctgccgacttccttggc
aacccggttggtctcttcaacaacatcagctctggccttacagacgtgttctatgaaccc
tatcaagggttgattctctcggacaagcccgaagactttggactcggtgtcgccaaggga
gctgcctcgcttgtcaagaagtccgtctacgggttttccgattccttctccaagttcacc
ggcagcttgtccaagggtctcgcagctgcaactcttgacaagcagttccaggatcgtcgg
cgcatcacgcgtgcgcgcaacaggcccaagcacgctctctacggagtcactaccggtgcc
aactcgctcttcacgagcgccgcatctggcgtgggtggactcgtacgcaagccgctcgaa
ggcgccgagcaagagggcgccctgggattcttcaagggcatcggcaagggcgtcgtagga
tttgcaacgaagcccgccatcggtgttctggacatggcttccaacgtttccgaaggcatc
cgaaacacaacgaccgtttttgacggctcagagcttgaccgcgtccgaccggctcggttc
gtgccttcggacgggattgtgcggccctacaacgctcgggaagcgctcgggcagtcttgg
ttgaagcaagttgataatggcaagtacttcaacgaggactatattgctcacctcgaacta
ccacgcgaagatatggtggtaatggtcacgtacgctcgcatccttctcattcgcagccgg
cgcttgacctccgagtgggatgtccccctaaaggatgtgcaaaccattgcaaaggagcgg
acaggcctgagcctgactctgagaggtggcaccaatgggccattcattcctgttggcgat
gaaagcggccgcggtttcttgtacaagatggtggctgtcgccgtagaggaattcaacagg
cgattcagaggaatggagtga
DBGET
integrated database retrieval system
