Colletotrichum higginsianum: CH63R_12400
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Entry
CH63R_12400 CDS
T08176
Name
(RefSeq) F-box/WD repeat domain-containing protein 1A
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
chig
Colletotrichum higginsianum
Pathway
chig04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CH63R_12400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
chig04121
]
CH63R_12400
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_12400
Ubiquitin system [BR:
chig04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
CH63R_12400
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
CH63R_12400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WD40_Gbeta
F-box-like
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_2nd
WDR55
ASA1
Beta-prop_EML
Beta-prop_WDR41
TRM82_WD
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
F-box
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_NWD2_C
WDR90_beta-prop_4th
CFAP251_N
PAC11
F-box_4
MgtE_N
Motif
Other DBs
NCBI-GeneID:
28871481
NCBI-ProteinID:
XP_018151791
UniProt:
A0A1B7XU48
LinkDB
All DBs
Position
9
Genome browser
AA seq
1017 aa
AA seq
DB search
MSSMAAFASQDPDEGYSEDPLNPSSSSLHYVSSAARPPADLPAWLARHLPGLSVSAKTEL
AMAILDNLPTTAVVDIVQRLHPRLYIDFVHYLPPEVCLKILGYLDPLSLINVAMACRAWH
ELALDRKLWENLYHMEGWKALYSEIHRWEDKVNEGLNHSASSLHRVRSSEDGHTYKKRAI
SEDDDLEMTDAGAALPREEPPNSSANTVMGSSIFGSPASATPQPGDMDVDRSASASNSRS
RERSLGFDSMGKGKGKGKAALVKEESLPPMVPDDARGGLACSTLWSWDAPSSRYKLNWKY
IYTMRRRLEQNWELGKCSHFQLPHPDHLDEGHQECIYSLQYDSDYIVSGSRDKTIRIWSM
HTRRLQMKPLEGHTGSVLCLQFDSDPEEDLVVSGSSDSDVILWRFSTGKIIQRLKNAHSE
SVLNVKFDKRILVTCSKDKTIKIFNRRPLRYGEPGYGDVDVVFSAPTRLRNYSYGNPMDD
LPLKPPYTMIGVLEGHGAAVNAVQICKNEVVSASGDRNIKVWDWTKQVCIRTVVGHGKGI
ACVQYDGRRIVSGSSDNEVKVFDRASGLEVASLRAHTSLVRTVQAGFGDLPFSADEDKAE
AKRVDETYFKAIESGVIAPFTEYSRSRRGQPRNAGSSRPEDITAYGAALPPGGGGGKYAR
IVSGSYDQSVIIWRRDKEGVWKDMQHLRPEEAAAAAQAQARADSQAAAEALLAAAGQGAL
SHMVASHAARGPSTGSSRAATLALAAQDPAQVFMQLVDTVVPQGPTQLRQTLHNYPTMAM
SHRAHIQAAIGREPNSRIRDELRNALHAALLEAQVILAGGHGPAREQPTIVPPSLPPLGP
ATSGSATAGSAGGSTSGPLFDMPPSRQLTTAVSAGSVHARRPDVRSQLGPAAGATAGTAG
NTSPPAAPQVQGHLHIQGQGQPTQQGQGQGQVPTQPGAPVQTQATPVPVQGAQHPVPGAA
HHPHMANGDNGPARVFKLQYDARRIICCSQTNTIVGWDFCNNDPELEEVARFFGTVE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatggccgccttcgcttcccaagaccctgatgagggctattccgaagacccc
ctcaaccccagctccagcagccttcactatgtctcaagcgcagcccgcccgcctgccgac
ttgcctgcctggctggcgagacacctgcccggcctctccgtttctgccaagactgagctc
gccatggctatcctcgacaacctgcccacaacggccgtcgtggacatcgtccagcgcctg
catcctcgcctctacatcgacttcgtccactatctgcccccggaggtctgcttgaagatc
ctcggctacctcgaccccttgtcccttatcaacgtcgccatggcttgccgcgcctggcac
gagctggccctcgaccgcaagctgtgggagaacctataccacatggagggctggaaggcc
ctgtactccgagatccaccgctgggaggacaaggtcaacgagggcttgaatcactccgcc
agctccctccacagggttcgatcctccgaggacggccacacctacaagaagcgcgccata
tccgaggacgacgacctcgaaatgacggacgccggagccgccctaccccgggaagaaccc
ccaaacagctccgccaacaccgtcatgggcagcagcatttttggaagccccgcctcggcg
acgcctcagcccggagacatggacgtcgaccgctccgcctcggcctccaacagccggagc
cgagagagaagcttaggtttcgattccatgggcaagggcaagggcaagggcaaggcggcg
cttgtcaaggaggaatccctgccgcccatggtccccgacgacgcccgcggaggccttgcc
tgctcgaccctctggtcctgggacgcacccagctcgagatacaagctaaactggaagtac
atctacacgatgcgccgccgcctggagcagaactgggagcttggcaagtgctcccatttc
cagctgccccatcccgaccacctcgacgagggccatcaggagtgcatctacagcttgcag
tacgacagcgattacatcgtcagcggcagtcgagacaaaacgatccgcatctggagcatg
catacccgtcgcttgcagatgaagccgctcgaggggcacaccggatccgtcctgtgcctg
cagttcgattcagacccggaggaagacctcgtcgtctctggcagcagcgactcggacgtc
attctctggcgtttctcgacgggcaagatcattcagcgcctcaagaacgcgcactccgag
tccgtcctcaacgtcaagtttgacaagaggatcctcgtcacctgctccaaggacaagacc
atcaagatcttcaaccgccgacccctgcgctacggtgaacctggctacggcgacgtcgac
gttgtcttctctgccccgacccgcctgcggaactacagctacggaaaccctatggacgat
ttgcccctcaagcccccttacaccatgattggtgtactcgagggccacggcgcggccgtc
aatgccgtccagatctgcaagaacgaggtcgtctcggccagcggcgacagaaacatcaag
gtctgggactggactaagcaggtgtgcattaggaccgtcgtcggccacggcaagggcatc
gcctgcgtgcagtacgacggtcggaggattgttagtggcagcagcgacaacgaagtcaag
gtatttgaccgcgccagcggtctcgaagtggccagcctgcgggcgcataccagcctcgtc
cggaccgtccaagcaggtttcggcgacctcccatttagcgctgacgaggataaggccgag
gcgaagcgggtcgacgagacgtacttcaaggcgatagaatccggcgtcatcgcccccttt
accgagtacagtcggagccgccgaggccaacctcgtaatgcgggcagtagcagaccggag
gatattacggcgtatggcgccgctctacccccgggcggcggcggcggcaagtatgctcgc
attgtttccggctcgtacgaccagagcgtcatcatctggcgtcgcgacaaggagggcgtg
tggaaggacatgcaacacttgcgacccgaggaagccgccgcagcagcccaggcgcaggcg
cgcgcggactcgcaagcagctgccgaggcgttgcttgcagccgccggccaaggcgcgttg
tcgcacatggtggcctcgcacgctgcccggggaccttccaccgggtcttctagagcggca
acacttgctctcgccgcacaggaccctgctcaagttttcatgcaactcgtcgacaccgtc
gtgccccaggggccgacccagcttcgccagaccctgcacaactacccaaccatggccatg
tcacacagggcgcacatccaggccgccatcggccgagaaccgaactcgcgtattcgggac
gaactccgcaatgcgcttcatgcggccttgctagaggcgcaagttatcctagccggcggg
catgggcccgctcgcgaacagccgaccatcgtcccgccttcgttaccaccgcttggtccg
gctacatccggttctgctacggctgggtcggcgggaggttctactagtggcccccttttt
gacatgccacccagtagacaattaaccacggccgttagtgccggaagtgttcacgctcgc
cgacctgatgtacgcagccaactgggtcctgccgccggcgctaccgccggcaccgccggc
aatacctcgccgcctgcggcgccccaggtacagggacacctgcatattcaaggtcagggc
caaccgacacagcagggccaaggacaagggcaggtgccgacacaaccaggagcgcccgta
cagacgcaggcgacgccggtgccggtacagggagcgcagcacccggtgcccggcgcggcg
caccacccgcacatggccaacggcgacaatggcccggcacgggtgttcaagttgcaatac
gacgcccgcagaattatttgttgtagtcaaacaaataccattgtgggctgggacttttgc
aacaacgacccggagctggaggaggttgcgcggttctttggcacagtggagtag
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