Colletotrichum higginsianum: CH63R_12598
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Entry
CH63R_12598 CDS
T08176
Name
(RefSeq) Pectate lyase E
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_12598
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CH63R_12598
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Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
28871679
NCBI-ProteinID:
XP_018151989
UniProt:
A0A1B7XUN1
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Position
9:complement(1172763..1173965)
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AA seq
359 aa
AA seq
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MIRMIAAGREGKGGKEGMLNGEGAEDTTRFCPASKDIRRSRHPPHHRSSLFLFLITFISI
FRYSLSLPIQLLTFFNPGGYSFIFFLQHTSNSSNSTCFLNQPNLKMKFSAVIAAISATAA
FAAPGSESSPNNFGAIEKRASFPIPASKGTVTYKAAQKVSGTFDGGLKTYGRGVKCTGQA
EGGDKDAVFILANGATLKNAIIGADQIEGVHCQGSCTIQNVWWTAVCEDALSLKGDGNAS
VIGGGARGASDKVIQHNGLGTVTIDGFTVVDFGKLYRSCGNCKTMGKRSVVVKNVKAYNG
KMLTGINSNKGDTSTITGTCATSVKEICTEFQGTTPGNEPKKLRTGASSACKYSTLKAC
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatgattgctgcgggaagggaagggaaggggggaaaagaaggtatgttgaat
ggagaaggggcagaagatacgacaagattctgcccggcatcgaaagatataagaaggtcg
cgacatcccccccatcatcgatcgtctctctttctattcctcatcactttcatcagcatc
ttccgctacagtctctctttaccaatccaactactcacattctttaaccctggtggttat
tcattcattttttttttacaacacacatccaactcttccaactctacgtgttttctaaac
caaccaaatctcaaaatgaagttctccgctgtcatcgccgccatctcggccaccgctgcc
ttcgccgcccccggctccgagtccagccccaacaacttcggcgccatcgagaagcgtgct
tccttccccatccccgcctccaagggaaccgtcacctacaaggccgcccagaaggtctct
ggcaccttcgacggtggtctcaagacctacggccgtggcgtcaagtgcactggccaggct
gagggtggcgacaaggacgccgtcttcatcctcgccaacggcgccaccctcaagaacgcc
atcatcggtgccgaccagatcgagggtgtccactgccagggctcctgcaccatccagaac
gtctggtggaccgctgtctgcgaggacgctctctccctgaagggtgacggcaacgccagc
gtcattggcggtggtgcccgcggcgcctccgacaaggtcatccagcacaacggtctcggc
accgtcaccatcgacggcttcaccgttgtcgacttcggcaagctgtaccgctcgtgcggt
aactgcaagaccatgggcaagcgctccgtcgtcgtcaagaacgtcaaggcctacaacggc
aagatgctcaccggcatcaactccaacaagggtgacacctccaccatcactggcacctgc
gccacctccgtcaaggagatctgcaccgagttccagggcaccacccccggcaacgagccc
aagaagctccgcaccggcgccagctccgcttgcaagtactccaccctcaaggcctgctaa
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