Colletotrichum higginsianum: CH63R_12685
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Entry
CH63R_12685 CDS
T08176
Name
(RefSeq) chromo domain-containing protein
KO
K11595
chromo domain-containing protein 1
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_12685
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
CH63R_12685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo
Motif
Other DBs
NCBI-GeneID:
28871766
NCBI-ProteinID:
XP_018152076
UniProt:
A0A1B7XUY8
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Position
9:complement(1450023..1454096)
Genome browser
AA seq
1357 aa
AA seq
DB search
MDASGLFVEENGAPDDDAISINSTLVSEHDSDEEWLVEGIRYQTREGGKDKYLVEWTGYP
IEEATWEPEENVTDELLQEWRDTEAKQARGEEEPFDIVAWQEAVDKRYDDKYQRHHKRNT
ERKRRGLQLKLWRGETKADYYVSDEDVSEDDYNAIIPPPKPVERQTETSPIEDIRPKKPL
KQAAVARPVHRKRTTMAEKATDSTKSPTKKKASSPVSQPHPQSSSLASAANGSWGAAKKS
TASKPAATAAVSRLAAPTASAWPAHKAKKTAISSRTMIRLHNSGSGINVFAAGKQSRQGR
QLVQNVADPTKDPRMFTNFRLRRKAELQSRDKADVASGAMPTKLFSISSGPPAGSNSDTS
PGTSSTVLRSALKHSADGLMAISASDSSATVSEITDTALPPSSEPQSTRPIVKNRRSVQF
ADLPLVNEPELMGEMVTSPISRPKRLKSPPMPSDPSQPSQPPPKPRSILRKLSVAEYQSR
SAGQSFEKVVVLGPSGTKGVQMTFENIRPDSDPWHSHFVKKDSLHFSRTLNALTFTSQRG
SIVGQNLSHGAVRPTLASDQEIISRAAERLRLGPFGVACFHEEFLIIIYPADCEDWKKVI
AEAEVSNPATVTLRYAIFKPQSIATKPLPAKRRCAPRSTEPRSTIFRDLLRLNYRQLLSP
GMRDIHHNFYLAFPPSRKLLLDAVSEWLHVENPSCRVFSTKTTGDWAAFTNPKIVAQGVI
IVHEAATDTLRQFPGLLRLLTHSKSAAYVFWCIGESLQQHPLYPSIRSTHHQTEPGKVEL
TRFFPHGNAILVTPSFLVSEPRRAQQLFEWYKKTHDKPYNNQKIVAAANIVDYLRDLAFE
RSTYRDILLTEGDEQRQRSDVEREQAAQLAGLSKEDCTARFNTWAIVDGLRLPAQTSIVP
DEQLEPIVLADQSIDANDEQSLVNWFGCWSQTRFDQFRKFHVLGTDGSSDTSHLIKACDI
PFYPAGAGRDPGAEPRSDGPLLEPTASDPDHPRQPHDGVTKMLGGLAAHFFSTKLMELAK
ECDNARWCPFAKLYGFPVSYFKDIADTADSYGDFHRNFATFERWLEFPWPFFTQFLPGFR
PPSDARGPPVFNTYFTLFYTPDEDSQCRPPTRHPWLAIWRVQAPHRPWEGTELLIWDIAA
KDRFPTGDRFYESQLTSPQQHLIGMIREKGAAKHRGLDLKQVWIGGFDSVPTEYTSPIDV
TLANLEAMMRDVKGYLPAIELLLSSRGFHKIYPGAAPAPRRPITPDGMDIDPIVRPQNHN
GDGKIIFHPPRACRPIRHSRCENLFYKWVMNLDRRDKRKAYPYTFKPTLDWYQEQQVAEN
RNFEHINVSSWKRVFELVRIPPTSGKDSEGTRVESKK
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatcaggcttgttcgtggaggaaaatggggcgccagatgacgatgccatctcc
atcaactctaccctagtatccgaacatgattcagatgaggagtggctcgtcgaaggtatc
cgctaccagactcgtgaaggcggaaaagacaaatatctggtggagtggaccggctatcct
attgaagaagcaacgtgggaaccagaggagaacgtaacggacgagctgcttcaagagtgg
agagatacggaagcaaagcaagcccgaggcgaagaggagccctttgacatcgtcgcctgg
caggaagccgtggacaagcgttacgatgacaaatatcagcgacaccataagcgcaacact
gagcggaagcgacgaggcctgcaactcaaactgtggaggggcgaaaccaaagccgactac
tacgttagtgacgaagatgtcagcgaggacgattacaatgccatcattccgcccccaaag
cctgttgagcgacagacagagacaagtcctatcgaggacattcggccaaagaagccactc
aagcaggcggccgtggcaagaccagtccaccgcaagcggaccacgatggcagagaaggcg
acggatagtactaagtcgccaacgaagaaaaaagcctcgtcgcccgtttcacagccacac
ccgcaatcatcatcactcgcgtcggcggcaaacgggtcctggggggctgcgaaaaagtcg
actgctagcaagccggccgctactgcagccgttagtcggttggctgctcctacggcatct
gcatggcctgcacacaaggctaagaagaccgccatcagctcgaggacgatgatcagatta
cacaacagtgggagcggcatcaacgtctttgccgccggcaagcaatcaaggcaaggtcgt
caattggtgcagaacgtggcagacccaactaaagatcctcgcatgtttacaaactttcga
ctgcggcggaaggccgagttacaaagccgtgataaggcagatgtggcgtctggcgctatg
ccgactaagctattcagtatcagcagcggtcctcctgcaggctcaaactctgacacaagc
cctggcacttcaagtaccgttcttcggtctgctttgaagcattcggccgatggcttgatg
gcgatatccgccagcgactccagtgctacggtttcggagataaccgatacggcacttccc
ccgagctcagagccgcagtctacgaggcccatagtcaagaataggaggtctgttcagttt
gccgacttaccgcttgtcaatgagccggagttgatgggcgagatggtcacgtcgccaatc
tctcgcccgaaaagactcaagtcacccccgatgccatcagacccgtctcagccatctcag
ccacctccaaaaccccgatctattctccgcaaactgtccgtagcagaataccagtcgcga
agcgcgggccagagctttgagaaggttgtcgtcctgggcccatcaggcaccaagggcgtt
cagatgacgtttgaaaacatcagacctgactccgacccatggcactcacacttcgtcaaa
aaagattcactccatttcagcagaaccttgaatgcccttacttttacctcccaaagaggg
tcgatcgtggggcagaacctgtcacacggggccgtccgaccgacactggctagcgaccaa
gaaattatcagcagagccgctgaacggctaagattaggtcctttcggggttgcctgcttc
cacgaagagttcctcatcatcatctatcccgccgactgtgaggattggaagaaggtgata
gctgaagccgaagtcagcaacccggcaaccgtcacgttgagatatgccatattcaaaccg
cagtcaattgccacgaagcccctgccggcgaaaaggagatgtgctccacggtcaacagag
ccacgcagtacaatctttcgggatctgctccgtctcaactaccgtcaacttctatcacct
gggatgcgagacatacaccacaacttctacctagcgttccctccgtccagaaagctcttg
ctcgatgctgtgagcgagtggcttcatgtggaaaatccctcttgcagggtgttttccacc
aagactactggcgattgggccgcctttaccaatccgaagattgtcgcgcaaggagtcatc
attgttcacgaggcagccactgatactctccgacagttccctggcctgctcaggctactg
actcacagcaagagtgcagcttacgtgttctggtgcattggggagtcacttcagcagcac
cctttgtatccttccatccggtccacgcaccaccagacagaaccaggcaaagttgaattg
acgaggtttttcccccatggcaacgcgatactggtgacgcccagcttcctggtgtcggag
ccaagacgtgctcaacaactctttgagtggtacaagaaaacgcatgacaaaccctacaac
aaccaaaagattgtagccgctgcaaacatagtcgactacctacgagatctcgcattcgag
aggtccacttatcgcgatatattgttgacagagggtgatgagcagcgccaacggtccgac
gtagagcgagaacaggcagcacaactagcaggcctgagcaaggaagactgcacggctcgc
tttaatacttgggctattgttgacggacttcggttacctgctcagaccagcattgtgccg
gacgagcagctcgagcccatcgttctcgctgaccaatccatcgatgccaacgatgagcaa
agcctggtgaattggttcggctgctggtcacaaactcgattcgatcagttccggaagttc
catgtcctgggcaccgacggcagttccgacaccagtcatctcatcaaagcctgcgacatt
cccttctaccctgcgggcgcagggcgcgatccgggagccgagccaaggagtgacggtcct
cttttggaacctactgcaagcgaccccgaccatccccgtcaaccccacgatggtgtaacc
aagatgctcggggggttggctgctcacttcttttctaccaagttgatggagctggcaaag
gagtgtgacaatgccaggtggtgcccgtttgcgaagctgtacggcttcccagtttcttac
ttcaaagatatcgccgatactgctgactcatacggagatttccatcggaactttgcgacg
ttcgagagatggttggagtttccctggccattcttcactcagttcttgccaggcttccga
cccccaagcgacgcacgtgggccacctgtcttcaacacctactttaccttgttctacact
cccgacgaagattcccaatgtagaccacccacccgtcacccatggctcgccatttggcga
gttcaggcacctcacaggccgtgggaagggacagagctcctcatctgggacattgcagcc
aaggaccggtttcccacgggagaccgcttttacgagtcccagctcacctcgcctcaacaa
catctcatcgggatgatacgagaaaagggggcagccaagcatcgaggtcttgatttgaag
caggtctggattggaggtttcgattcagtccccaccgagtacacctcgccgatcgatgtg
accttggccaacctggaggccatgatgagagatgtcaagggatatcttcctgcaatcgaa
cttcttctttcctcgaggggttttcacaaaatctatcccggtgccgcgcctgccccgaga
aggcccatcacgccagatgggatggacatcgatccgatcgtccgtcctcagaatcacaac
ggcgatggcaagatcatctttcatccgccccgcgcttgcagaccgatccggcacagccgg
tgcgagaacctgttctacaagtgggtgatgaatcttgacagacgggacaagcgtaaggcg
tacccctatacgttcaaaccgaccctagactggtatcaggagcagcaagtggcggagaac
cgaaactttgagcacatcaacgtctcttcttggaagcgcgtcttcgagttggtacgcatt
cctcccaccagtgggaaggacagcgaggggacgcgcgtggagagcaagaagtga
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