Colletotrichum higginsianum: CH63R_12716
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Entry
CH63R_12716 CDS
T08176
Name
(RefSeq) Nuclear pore protein
KO
K14309
nuclear pore complex protein Nup93
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_12716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_12716
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CH63R_12716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
28871797
NCBI-ProteinID:
XP_018152107
UniProt:
A0A1B7XUY6
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All DBs
Position
9:complement(1547918..1551366)
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AA seq
1122 aa
AA seq
DB search
MSLFGSNPLGSLGTSTSGTQQQGNTGGGLFGQQNNTNNQQTSSTPASGGLFGNLGQNKPQ
TGGGLFGGGAATTAQPASGSSLFGQPQQQQQQQGQQQQSGGLTLGGLGGLGASTAQKPSL
FGGNQQNQNQTTGTTFGQTNTNTLGSSLFPPQQQTQNVNNQSQAQQGQPSGAYFDSLFAK
SKKQGDGESGMEDLPSLQLGLGDLRQRLKKLGTKTQERPSDGRAHYLLAASGVDPGMAAK
DLGSLDLQTGRVERPSGYSPAEVDVETYLANLQTKTTMSMIADGLERSVRDFDNFLEDNV
TMEWEAQRKRIYEHFGIKAREETSSFGPAASTREASGGFGRSRRSKSQAAGARSGRASVL
GKSSMHRSVIGNASKIGSHQPEFSDVDRSADNGGLLTGHINSDDRSLREKQSKLSEKVRN
LNQARLTAHPYPILSELADVEHRSLDPYAPHIVEAYHAVREIVGEDPEAETTINGATAKE
RQFAKMYLDESANSSNSISMRKRLLDGANRYLEKQFLQEVEGLISKHPHEANLGGRPDIV
SKIRAYIRLRSARKDLVPDNTELQQVGGEYVWAIVFYLLRSGHVSEAAKYVNDNANPFRS
IDRTFQSYLNGYASNEDRRLKRTLQDRCNAEYSQRVRNAPDNSIDPFRMACYKIIGRCDL
NNRSLDGLNTDINDWIWLQFNLAREGDRSVEVASEAYGLSELQSSIKEIGAKHFPKTSAE
DNSGSFGMFFYLQVLSGMFEEAIAYLYPFSYVDAVHFAIALEYYGLLRPSDPFSASNDLR
SLNVKDLVQINFGRMIGYYTRDFRAADVVSAVDYLTLICLNMDLSGEAGRRHANLCWEAL
RELVLETREFSKLIGDIRPDGQRIRGIIEERGSLIGLTEENDFINTVTVQAASFADENGR
TTDSVLLYHLAGEYDTVVSIVSRALSEAISLEIGEDPMRLMPVKPRAASQEAESSLSLAS
IDDPVELARTMMSMYERDAMFHRKIQEQNRVACRVLLEMSTIKSLVEAGQWAQCLDKIRG
LEILPLDASGDPSIIRAYAAKFSGLSQPVSINVPNLLMWTIICCTRQRDQLTGGQFSGNE
GTRRMMVEQMKQMTLDLTTYTSQLRYRFPPHLHEALARASAE
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcttcggaagcaatcctctgggtagcttgggcacctcgaccagcggaacccag
cagcagggcaacacgggaggaggtttgtttggacagcaaaacaacacgaacaaccaacaa
acgagctcgacgcctgcttcaggcggtcttttcggaaacctgggtcaaaacaagcctcag
acaggcggcggattgttcggcggaggcgctgctacgacggcacaaccggcatcgggatcc
tcgctgtttggccagccgcagcagcaacagcaacagcagggccagcagcagcagtccgga
ggactcacattgggaggcttgggtggactgggagcatcgacggcgcagaagccatctctc
tttggcggcaatcagcagaaccagaaccagacgaccggcacgaccttcggccaaaccaat
accaataccctcggcagctctctcttccctccgcagcagcaaacccagaatgtcaacaac
cagtcacaggcccagcaaggccagccgtcgggtgcatactttgacagtctttttgcgaag
agcaagaagcagggagacggcgagagtggcatggaagacctccccagcctgcaattgggc
ctgggcgacctgcgccagcgcttgaagaagctaggaacaaagacacaagagcgtccgtca
gatggaagggcacactaccttctcgctgcgtcgggtgtcgaccctggaatggctgccaag
gaccttgggtcccttgacttgcagactggccgtgtcgagagaccctctggatactccccc
gctgaagtcgacgttgagacgtaccttgcgaatctgcagacgaagacaactatgagcatg
atcgccgacggtctcgagaggtctgttcgcgactttgacaactttttagaggacaacgtg
acgatggagtgggaggcccagcgcaagcggatttacgagcacttcggaatcaaggcccgg
gaagagacttcttctttcggacctgcggcatcgacgagggaggcttccggtggctttggc
cgttcgagacgaagcaagagccaggcggctggagcccgctctggcagagccagtgtgttg
ggcaagtctagcatgcaccgctctgtcatcggcaatgcgagcaagattggttcccaccaa
cccgaattctctgatgtcgatcgttcagccgacaatggcggtttgttgaccggccacatc
aactccgacgacaggtccctacgcgagaagcagagcaaactttccgagaaggttcgcaac
ctcaaccaggctcgcctcaccgcccacccgtacccgattctttcagagctcgcagacgtc
gagcaccgctctctggatccatatgcgccacacattgtcgaggcgtaccatgcggtgcga
gagattgttggggaagaccccgaagccgagactaccatcaatggtgccacggccaaggag
cggcagttcgccaagatgtacctggacgaatccgccaactcatccaactcgatatcgatg
cggaagagattactggatggcgccaacagatacctggagaagcagttcctacaagaggtt
gagggactcatatcaaaacatccccacgaagccaatctcggtggtcgtcccgatatcgtc
agcaagatcagagcctacatccggttacggtccgcaaggaaggatctggttcctgacaac
acggagcttcagcaggttggtggcgaatatgtttgggcgattgtcttttaccttctgcgg
tctggtcacgtcagcgaggctgcgaagtacgtgaatgataacgccaatcccttccgtagc
attgatcgcacgttccagagctacctcaacggctacgcgtcgaatgaggaccgtcgcctg
aagcggactctgcaggacaggtgcaatgccgaatacagtcagcgtgtgcgcaacgctcct
gacaactccatcgatcccttccggatggcttgttacaagattatcggtcgctgtgacttg
aacaaccggagcctggacggactcaacaccgacatcaacgactggatctggctccaattc
aacctggccagggagggcgaccgctctgtggaggtggctagcgaggcgtacggcctttct
gagctgcagtcgagcatcaaggagattggggccaagcacttccccaagacctctgccgag
gacaacagcggcagctttggcatgtttttctaccttcaggtcttgtcaggcatgttcgag
gaggcgattgcatacctctaccccttctcctatgtcgacgcagtccacttcgccatcgct
ctcgagtattacggtctcctccgaccttccgacccctttagcgcttccaatgacctgcgt
agcctgaacgtcaaggacttggtccagatcaacttcggcaggatgatcggctactatact
agagatttcagagcagccgacgtcgtgtccgccgttgactatctgaccctcatttgtctc
aacatggacctgtccggcgaggctggccgtcgccatgccaacctctgctgggaggctttg
cgcgagctggttctcgagacccgtgagtttagcaagctcatcggcgacatccgccccgac
ggccagcggatccgcggcatcattgaggagcgcggctcgcttattggcctgacggaagag
aacgacttcatcaacactgtcaccgtccaggccgctagcttcgccgacgagaacggccgc
accaccgactcggtcttgctctaccacctggccggagagtacgataccgtcgtctctatc
gtcagccgcgcgctcagcgaggccatctccctcgagatcggcgaggatcccatgcgtctc
atgcccgtcaagccccgcgccgccagccaggaggccgagagcagcctcagcctggcgtcc
atcgacgaccccgtcgagctggcccgcaccatgatgtccatgtacgagcgcgatgccatg
ttccaccgcaagatccaggagcagaaccgggttgcttgccgtgtcctgctcgagatgagc
accatcaagtcgctcgtcgaagccggccaatgggctcaatgcctagataaaatccgcggc
ctcgaaatactccctctcgatgccagcggcgacccgagcatcatccgcgcctacgccgca
aagttctccggcctctcccagcccgtctctatcaacgtgccaaacctgctcatgtggacc
atcatctgctgcacgcgccaacgtgatcagctcacgggcggccagttcagcggcaatgag
ggcactcgccgcatgatggtcgagcagatgaagcagatgacgctcgacctcaccacctat
acctcgcaactgcgctaccgcttcccgccgcacctgcacgaggccctagccagggcttct
gccgagtag
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