KEGG   Colletotrichum higginsianum: CH63R_12765
Entry
CH63R_12765       CDS       T08176                                 
Name
(RefSeq) LSM domain-containing protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
chig  Colletotrichum higginsianum
Pathway
chig03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CH63R_12765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chig03019]
    CH63R_12765
Messenger RNA biogenesis [BR:chig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CH63R_12765
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CH63R_12765
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 28871846
NCBI-ProteinID: XP_018152156
UniProt: A0A1B7XV73
LinkDB
Position
9:complement(1756308..1757017)
AA seq 210 aa
MENLTISDAPPQGAQPVLGGRAPPPQQTPQLPPQMFTTAAQLLDMTDKKLMVALRDGRKL
IGVLRSWDQFGMYTMHARYRHPVMARGNLLSVRVSGRLTRRSPANLVLQDTVERVYAYPD
LEANPPREGGMFADIKRGIFLVRGENVLLLGEIDLDKDDDPPPGYEPADLKLVQGLAAER
KDKDKARDKGRIKKLSTLGFEGENMGEILL
NT seq 633 nt   +upstreamnt  +downstreamnt
atggaaaacctcaccatctccgatgcccctccccagggggcccagcccgttctcggcggc
cgcgcgccgccgcctcagcagacccctcagctgccgcctcagatgttcaccactgcggcg
cagctgctggacatgaccgacaagaagctcatggtcgcgctccgcgacgggcgcaaactg
ataggcgtcctccgcagttgggaccagttcggtatgtacaccatgcatgcacgataccgc
cacccagtcatggcgcgaggcaatcttctttcagtacgagtatccggacggctgaccagg
cggtctccagcaaacctcgtccttcaggacaccgtcgagcgcgtctatgcctacccggat
ctggaggccaatcctccccgcgagggcgggatgttcgcagacatcaagcgcggcatcttc
ctcgtgcgcggcgagaacgtgctccttctaggcgagatcgacctcgacaaggacgatgac
ccgccaccaggctacgagcccgccgacctcaagctcgtgcagggcctggcggccgagagg
aaggacaaggacaaggcgcgtgacaagggacggatcaagaagctgagcacgctcggcttc
gagggcgagaacatgggcgagatcttgctctga

DBGET integrated database retrieval system