Colletotrichum higginsianum: CH63R_12821
Help
Entry
CH63R_12821 CDS
T08176
Name
(RefSeq) Autophagy-like protein 18
KO
K17908
autophagy-related protein 18
Organism
chig
Colletotrichum higginsianum
Pathway
chig04136
Autophagy - other
chig04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
CH63R_12821
04136 Autophagy - other
CH63R_12821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_12821
03029 Mitochondrial biogenesis [BR:
chig03029
]
CH63R_12821
Membrane trafficking [BR:
chig04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
CH63R_12821
Mitochondrial biogenesis [BR:
chig03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
CH63R_12821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR35_2nd
BCAS3_WD40
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WDR55
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_IFT140_1st
Hira
EIF3I
Beta-prop_DCAF12
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
28871902
NCBI-ProteinID:
XP_018152212
UniProt:
H1VJ97
LinkDB
All DBs
Position
9:1924583..1926220
Genome browser
AA seq
467 aa
AA seq
DB search
MANTALNFITFNQDHSCLAVGTSKGFRIYHTDPFSKIFSSDDGNIAIIEMLFSTSLVALI
LSPRHLIIQNTKRSSVICELTFPSAVLAVRLNRKRLAVVLESEIYLYDISNMSLLFTIPT
SPNPGAICALSPSSENCYIAYPLPKPREDSGDKRPAHAPPLSTYVAPTSGEVLVFDTLTL
KAVNVIEAHRSPLCCICLNSEGTLLATASETGTIIRVFSVPGGQKLYQFRRGTYPSTIYS
MSFNLSSTLLCVSSTSDTVHIFRLGAPPPGNNSAAAASESPASPRQDRWSRSRSYDSANE
SPVGSAAGSPRSDLAEPAGPSNGGGGGGTQQINRRQSGSFSSMLRRSSQIMGRSVAGVVG
SYLPQTVTEMWEPLRDFAYIKIPKPSNSPTGPVRTGSGNMSGAQLPSGPLRSVVAMSSSS
PQVMVVTSDGGFYVYNIDMEHGGEGYLVKQFSVIDGDDKLDSSSYGT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaccgcccttaacttcattaccttcaaccaggatcacagctgtctggccgtc
ggtacatccaaaggcttccggatctaccacaccgatccgttctccaaaatcttcagcagc
gatgatggaaacattgccatcattgagatgctgttctcgacttctcttgttgccttgatc
ctctcgccgcgacacttgattatccaaaacacaaagaggtcctcggtcatctgcgaactc
accttcccatccgccgtgcttgccgtgcgtctgaaccgtaaacgcctcgctgttgtcctc
gagtccgagatttacctttacgacatttccaacatgagcctcctttttacgatccccacc
tctccgaacccgggcgccatctgcgctctctcaccctcctcggagaactgctacatcgca
taccccttgccgaagccacgtgaggactcaggtgacaagagaccggctcatgcgccccct
ctgtcgacatacgttgcgccgacgtctggcgaggttctggttttcgatacgctcaccttg
aaggctgtgaacgtcattgaggcccatcgctcgcctctctgctgcatctgtctcaatagt
gaaggaacacttctagcaacagcgagtgagactggcaccatcatccgtgtcttctccgtt
cctgggggccaaaagctgtaccagttccgtcggggaacgtacccttctacgatttacagc
atgtctttcaacctcagctctacccttctttgcgtctcctcgacctctgatacagtccac
attttccgtctcggagctcctccgccaggaaacaactcggccgccgctgcctcagagtcg
ccagcgtcgcctcgccaggatcgctggtccaggtcacgcagttatgacagcgccaacgaa
tcgccggtgggcagcgcggcagggtctccgagaagcgatctggccgagcccgcagggcca
agcaacgggggtggtggcggtggcacgcagcagatcaacaggcgacagagtggctctttt
agcagtatgctccggcgctcatcgcagataatgggccgtagcgtggccggcgttgttggc
tcgtatctgccacagaccgtgacggagatgtgggaacccctgcgggactttgcctacatc
aagattccaaagccgtccaactcgcccacaggaccggtgcggaccggcagcggcaacatg
agcggagcgcaactgcctagtggaccattgcgaagcgtcgtggctatgagcagcagcagc
cctcaagtaatggtcgtcacgagtgatggcggcttctatgtgtacaacatcgacatggag
cacggcggggaaggctatctggtcaaacaattttcagtcattgatggagacgacaaattg
gactcgtcgtcttacggaacgtaa
DBGET
integrated database retrieval system
