Colletotrichum higginsianum: CH63R_12837
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Entry
CH63R_12837 CDS
T08176
Name
(RefSeq) WD repeat domain-containing protein
KO
K24155
rabconnectin-3a
Organism
chig
Colletotrichum higginsianum
Pathway
chig04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CH63R_12837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_12837
Membrane trafficking [BR:
chig04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
CH63R_12837
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
CH63R_12837
RAVE complex
CH63R_12837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_WDHD1_1st
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
28871918
NCBI-ProteinID:
XP_018152228
UniProt:
A0A1B7XVE7
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All DBs
Position
9:complement(2040933..2045334)
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AA seq
1318 aa
AA seq
DB search
MRAVLPGRPRSGLQALATGFWDTRHFNVYITGSAFTILTDSDTVLQTIYDDDPSHLQAVA
FDESSGKIATCTKSVVRVYRPFGQPEDALKWGLQSSFPIPDPQNAADGVSLSWGGTEELL
VGHCALYLYSTIAEPAQLWNKPVPNPLKVAELSYDSAYIASVGLQDCLVKVWRRLTYGAD
DVRFDLAYLRHPDVITSLRWRKPFHAEQTVENALYTICADNVVRVWIGADTHASGHMNLW
GAIDLTSELREHSLKSPLTRVPLASFIIDGREVSAAAELTVQRRPAQEGKCDTALENLIA
LANKSPELCVASDGAGNMTIYAFEDVGSRTNKPKTAVKVASFESHLLDIRAGLHVQVQSY
CDRQTGRLHILAHDFDGQIHVYEANLVEFLDTINEQNRLTRRCIWSGHSAPIKKMVRNFS
GRAVVSRTEEGECVVWTHSEKNNLSRQSVIPGSAHIHRICVLRKGRFVVFLQHDTISLWD
CRPQRAILLERQPYEISGKPLCLLILPRQRVENYAVAQIATITSEQEGLVWEVNLPRYSH
QRTKAHTNGQDETSIREFCRFKLKDAEGIAYMLPVDPAGSAPVTSSFLDVFARDIAISYT
HTGRVDFWTARVDKTGKHVGWLSTSSAETGLSEPALVSGSTLKKAALVDSGRSQLFIWDI
GGARLEFTQDYGTHNTIQDLDWTSTPDSQSILAVGFQSKVVLLCQMRFDYLNKGPAWAAV
REISIREFTPHPIGDSTWLGDGHLVIGSGNQMFVHGRDYDLSSSLVSSLQLPHKKHGVWD
LFEAVQRFNGPLPVFHPQFLSQCILAGKSTVVRNVLMSLHQTLKFLIAGETVDDYLGLDP
AVFYTDKVSKASEAHLGSHFSLQTSKDEADETFGEETAYAINERLTKVGLRQLSGHEQIQ
LADIVECVGLVEKQRRSLDENGARFMLFFRQHGLRKGRTSEIQMSWREINWAYHSTSQDI
LTDFVIKQCHGTVRWEDARESGMFMWLSDLNALRTQFENVARNEYTKSDMKNPVDCSIYY
LALKKKTVLQGLWRIAHWNREQGATQKLLANNFEEPKWRTTALKNAYALLSKRRFEYAAA
FFLLADHLQDAVNVCLNQLKDLQLAVAIARVYEGDQGPVLRKLLEEEVLAVAAKEGNRWL
ASWVFWMLNRKDMAVRALISPVYTLVETPYAPDMRSKLFLTDDPALVVLYSQLRQKTLQT
LRGASKVTPRVEWEFVLHSAKLYDRMGCDLLGLDLEFKVDKLLVRNWEFLKPASSMTNGL
GGEVNPLKMLRRRSSLVVADLPMSSLHVAMRSGGSGKQSTTTVFQEPDSSSLLDSFGF
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagtcctcccaggcagaccgaggtctgggctccaagctcttgcgacgggcttc
tgggacacgagacacttcaatgtctacataaccggcagcgcatttactatcctcaccgat
tcggataccgttctccagaccatctacgacgacgacccgagtcatttgcaagccgtagcc
tttgatgaatcttcgggcaagattgccacctgtaccaaatctgtcgtaagagtctacagg
ccgtttggacagccagaagatgctcttaagtggggccttcaatcatcatttccaattccc
gatcctcaaaatgccgctgacggcgtctccttaagctggggtggtactgaagagctcctc
gttggccattgcgccctctacttgtactcgaccattgccgagcctgcgcagttatggaac
aagcctgtcccgaaccccctgaaggtcgcagagctctcgtacgactcggcatacatagct
tctgttggacttcaagattgtctagtcaaggtctggcgccgattgacttatggagccgac
gatgtgcgctttgacctggcctacttgcgccacccggacgttatcaccagtcttcgatgg
cggaagcctttccatgccgagcaaacggtcgaaaacgctctttatactatttgcgccgat
aacgtggtacgcgtttggataggcgcagatacgcatgcctctgggcacatgaatctttgg
ggggccatcgatttgacctctgaactccgagaacatagccttaaatctccccttaccaga
gtacccctggcttcattcatcatcgacgggagagaggtttcagctgccgccgagctcact
gttcagcgtcgtccagctcaggaagggaaatgcgacactgctctcgagaacttgatagcc
cttgcaaacaagagccccgaactttgtgttgcttccgatggcgcaggaaacatgactata
tatgctttcgaagacgttggttcgagaactaacaaaccaaagaccgctgtcaaagtcgca
agcttcgagtcgcatctactcgacatccgggctggtctacatgttcaagtacagagctat
tgcgatcgacagaccgggcggctacatatactggcccatgactttgatggccagattcat
gtctacgaagcgaacctggtggagttcctcgataccatcaacgagcaaaatcgtctcact
cggcgctgtatctggtccggtcattcggcgcccatcaaaaagatggttcgaaacttcagt
ggtcgagctgttgtgtctagaacggaagagggcgaatgcgttgtctggacccactcagag
aagaacaacctctcgcggcagagcgtcattccggggagcgctcatattcatcgcatttgc
gtcttacgcaagggtcgttttgttgtgtttttgcagcatgacaccatctctctatgggat
tgccggccacaaagggcaattttattggagcgacagccgtatgagatttcagggaagcca
ctttgtctcctaattctaccacggcaaagggttgagaattatgccgttgcacagattgcc
acgattacctcggagcaagaaggacttgtctgggaggtcaacctgcctcggtactcccat
cagcgtactaaggcacacaccaatggccaggatgagacgtcgatacgagaattttgcagg
ttcaaactgaaggatgccgaaggaatcgcttacatgctccctgttgatcctgcaggatcc
gcgccggtaacatcaagcttcctggatgtttttgccagggatatcgccatatcctatacc
cataccggccgagtagatttctggacagctagggtggacaaaacgggaaaacacgttggg
tggctctccacgtcttcagcagagaccggtctttcagagccggctctcgtcagtggaagc
actctcaagaaggctgcgctcgttgattcggggaggtcgcagctattcatatgggacatc
ggcggcgctcgtcttgagttcacacaggactatggtacgcacaacaccatccaggatctt
gactggacctcaacgccagactcgcaatcgatacttgcagtaggtttccagtccaaggtg
gtcctgctttgccagatgcgttttgactacctgaacaaggggcctgcttgggctgcagtc
cgggagatcagcattcgtgagttcacgcctcatccaataggcgactctacatggctaggt
gacgggcacctcgtcattggctctggcaatcagatgtttgttcacgggagagactatgac
ttatccagttctctggtcagcagcctacaacttccacacaagaagcacggcgtctgggat
ctttttgaggccgttcaaaggtttaatggcccgctgccggttttccatcctcaatttctg
agtcaatgtatccttgccggcaaaagcacggtagtgcggaacgtgctcatgtctctgcat
caaacactcaaattcctcattgccggtgagacagttgatgactacttggggttggatccg
gcagtcttttacacggacaaggtatcaaaggcgtcagaagcccatttggggtctcacttc
agccttcaaacatccaaagatgaggcagacgaaacgtttggcgaggagactgcatatgcc
atcaacgagcgactgaccaaggtcggccttcgacagctctcgggacacgagcaaatacaa
ttagcggatattgtggaatgcgttggcctggtagaaaaacaacgcagatcactcgacgag
aacggagctcgtttcatgttgtttttccgtcagcatggccttcgcaagggccggacaagc
gagattcagatgtcgtggcgagagattaactgggcttaccactcaaccagccaagacatt
ctcactgacttcgtcatcaaacaatgtcatggtaccgtgcgctgggaggatgcgcgagag
agcggcatgttcatgtggcttagtgacctcaacgctttgcgcacgcaattcgagaacgtg
gctcgcaacgaatataccaagagcgacatgaagaacccagtggattgtagcatctactat
ctagccctgaagaaaaagacagttcttcaggggctctggcgcatagctcactggaacaga
gagcaaggggcaacgcagaagttgctggctaacaattttgaagagcccaagtggcggacg
acagctttgaagaacgcttacgccctactcagcaagcgacggttcgaatatgcggcagca
ttcttcctgcttgccgatcatttgcaggacgctgtaaacgtctgtttgaaccagctcaag
gacctccagcttgctgtggcaattgctcgcgtgtatgaaggtgaccaaggtccggtattg
agaaagctcttggaagaagaagtgcttgctgtggcagccaaggagggtaatcgctggctc
gcgtcgtgggtcttctggatgttgaaccgcaaggatatggcggtcagggctctcatttcc
cccgtctataccctggtggaaacgccttatgctcctgatatgagatcgaaactcttcttg
acagatgatccagcgttggtggtgctgtactcgcaattacgacagaagacactccaaaca
ctgcgcggcgcgtcaaaggttaccccacgcgtcgagtgggaattcgttcttcacagcgcc
aagctctacgaccgtatgggttgcgatcttctcggtctggacctggagtttaaggttgac
aagcttttagttcgaaactgggagttcctaaaaccagcgtcgagcatgaccaacggatta
ggcggcgaggtgaatccgctaaagatgctacgccgacgtagttcgctggtggtggcagac
ttgcccatgtcgagcctccacgtcgcaatgagatccggcggatcgggaaagcagtcgact
accacagtcttccaagagccagactcaagctcgctgctcgacagcttcgggttttga
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