Colletotrichum higginsianum: CH63R_12844
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Entry
CH63R_12844 CDS
T08176
Name
(RefSeq) SWIB/MDM2 domain-containing protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
chig
Colletotrichum higginsianum
Pathway
chig03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CH63R_12844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_12844
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_12844
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CH63R_12844
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CH63R_12844
PBAF complex
CH63R_12844
GBAF(ncBAF) complex
CH63R_12844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DNA_pol_E_B
Motif
Other DBs
NCBI-GeneID:
28871925
NCBI-ProteinID:
XP_018152235
UniProt:
A0A1B7XVB2
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All DBs
Position
9:complement(2058505..2060302)
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AA seq
529 aa
AA seq
DB search
MPAMLAHRKFPSGLHMSQINGEAASLRRDIPRQAQDDTAKTRQRQYSLELTMPPKGPIMP
PGHHPQAAMNQAAMAQHHPPGQALTSELAKRRSRKPTDKTLPDGVEDCIADADVAHRYRE
LRDFERRLDATMTRKRLDIVETVGRNAKVRYKTLRIWISNTVEDQAWQGSGLSVDSFDFT
PSAEPSYKVKIEGRLLEDGQEDGSEEYTQNSDLVVGGGAAGSRRQSSLPTVKKQRFSHFF
KALNVDFDRTRSRAASDQTVEWKKPATVNAAAGAEFDEFTFKRSGDETMNITINLHRQED
PERYLLSPELADIVDMPQASRQEAVLAVWEYIKMMGLQEDEEKRNFRCDELLKKIVNGSD
VGIIPNLNDYIQPHLRPLPPVSLPYTVRVDEEFHKDPQPTIYDVRVAVDDPLKAKLVPFV
TNPAYASALKEVVAMDEQLATLVSAVANSKAKHSFFTSMSQDPTNFVRNWMSSQKRDLEV
IMGEATRGGGEDATGDDWRRGGKDSVWTSSNARESVSVMLAKQPTQASR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgccggccatgctggcgcaccgcaagttccccagcgggctccacatgtcccaaatcaac
ggagaggcggcatcgttgcggcgcgacatccccaggcaagcccaagacgacacggcgaag
acgaggcaacgtcaatattcacttgagctaaccatgccgcccaaaggacccatcatgccc
ccgggccaccatcctcaagcagccatgaaccaggccgccatggcgcagcatcaccccccc
ggccaggccctcaccagcgaattggccaagcgtcgaagcagaaagcccaccgacaagacg
ttacccgatggcgtcgaggactgcatcgcagatgccgatgtcgcccatagatacagagag
ttacgcgactttgaacgtcggctggacgcaacaatgacgcgcaagcgtctggacattgtc
gagacagttggtcgcaacgcaaaggtacgctacaagactctccgcatttggatcagcaac
acggtcgaggaccaggcatggcagggaagcggccttagcgtcgacagcttcgacttcact
cccagcgccgagccctcatacaaggtcaaaattgaaggccgtcttcttgaggatggacag
gaagacggctccgaggaatatacgcagaactcggatctcgtagtggggggcggcgccgcc
ggctcgaggcgacaaagctcgttgcctacagtcaagaagcagcgcttctctcatttcttc
aaagccctgaatgtcgactttgaccgtacccgctcgagagctgcatcggaccagaccgtc
gaatggaagaaacctgctacagtgaacgctgcagctggcgccgaatttgacgagtttacc
ttcaagcgcagcggggacgaaactatgaacattaccatcaatctgcaccgccaggaggat
cccgagcgatacttgctgagtcccgagctggccgacatcgtggacatgccgcaggcctct
cgtcaagaggcggttctggctgtttgggagtacataaagatgatgggtctgcaagaggac
gaagagaagcgcaacttccgttgcgatgaactcctgaaaaagatcgtcaacggtagtgat
gtaggaatcattcccaacctcaacgattacatccagcctcacctccggccactgcctcct
gtcagcttaccttacaccgttcgggttgatgaggagttccacaaagacccccagcccacc
atttacgatgtgcgggtagctgtcgatgaccccctcaaggccaagctggtacccttcgta
acaaaccccgcgtatgcgagcgccctcaaagaggttgttgccatggacgagcagctagcg
acgctagtatcggctgtcgccaattccaaggcgaagcattcattcttcacgtcaatgagc
caggaccccaccaactttgtgaggaactggatgagctcgcagaagcgagacctcgaggta
atcatgggagaggctactaggggaggcggcgaagatgccaccggagacgattggagacgt
ggcggcaaggacagcgtgtggacatcttcgaacgcgcgcgagagcgtcagtgtcatgctg
gccaagcagccaacacaggcttctaggtga
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