Colletotrichum higginsianum: CH63R_12878
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Entry
CH63R_12878 CDS
T08176
Name
(RefSeq) tubulin alpha-B chain
KO
K07374
tubulin alpha
Organism
chig
Colletotrichum higginsianum
Pathway
chig04145
Phagosome
chig04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
CH63R_12878
09142 Cell motility
04814 Motor proteins
CH63R_12878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_12878
03036 Chromosome and associated proteins [BR:
chig03036
]
CH63R_12878
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
chig04812
]
CH63R_12878
04147 Exosome [BR:
chig04147
]
CH63R_12878
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CH63R_12878
Chromosome and associated proteins [BR:
chig03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
CH63R_12878
Cytoskeleton proteins [BR:
chig04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
CH63R_12878
Exosome [BR:
chig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CH63R_12878
Exosomal proteins of other body fluids (saliva and urine)
CH63R_12878
Exosomal proteins of colorectal cancer cells
CH63R_12878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
28871959
NCBI-ProteinID:
XP_018152269
UniProt:
H1V3Y3
LinkDB
All DBs
Position
9:2197699..2199614
Genome browser
AA seq
450 aa
AA seq
DB search
MREVISINVGQAGCQIANSCWELYCLEHGIQPDGYLTEERKAADPDHGFSTFFSETGQGK
YVPRAIYCDLEPNVVDEVRTGPYRGLFHPEHMITGKEDASNNYARGHYTVGKELIDQVLD
KVRRVADNCVGLQGFLVFHSFGGGTGSGFGALLMERLSVDYGKKSKLEFCVYPAPQTATS
VVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLGLERPNYENLNRLIAQVVSSITA
SLRFDGSLNVDLNEFQTNLVPYPRIHFPLVAYAPMISAAKAAHEANSVQEMTMSCFEPNN
QMVKCDPRHGKYMATCLLYRGDVVPNDAHAAVATLKTKRTIQFVDWCPTGFKLGICYQAP
QMVPNGDLAKVSRAVCMLSNTTAIAEAWSALSTKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALERDYEEVAADSLEGEEGLEAEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaggtcatcagcatcaacgtcggccaggctggttgccagatcgccaactcctgc
tgggagctttactgcctcgagcacggtattcagcctgatggatacttgaccgaggagcgc
aaggcggctgatcccgaccatggcttcagcactttcttctccgagactggccagggcaag
tacgtcccccgtgccatttactgcgatttggagcccaacgtcgtcgacgaggtccgcacc
ggcccctaccgtggcctcttccaccccgagcacatgatcactggcaaggaggatgcctca
aacaactacgcccgtggccactacaccgtcggcaaggagctcatcgaccaggtcctcgac
aaggtccgccgcgtcgccgacaactgcgtcggtctccagggcttcctcgtcttccactcc
ttcggcggtggcaccggctctggtttcggcgccctcctcatggagcgcctgtccgtcgac
tacggcaagaagagcaagctcgagttctgcgtctaccccgcccctcagaccgccacctcg
gtcgtcgagccttacaactctatccttactacccacacgaccctggagcactccgactgc
tctttcatggtcgacaacgaggccatctacgacatttgccgccgcaacctgggtcttgag
cgccctaactacgagaacctcaaccgcctgattgctcaggtcgtttcctccatcaccgcc
tccctccgcttcgatggttccctcaacgtcgacttgaacgagttccagactaacttggtt
ccctacccccgcatccacttccctctcgtcgcctacgcgcccatgatctccgccgccaag
gctgcccacgaggccaactccgtccaggagatgaccatgtcctgcttcgagcccaacaac
cagatggtcaagtgtgaccctcgccacggcaagtacatggccacctgcttgctgtaccgt
ggtgacgtcgtccccaacgacgcccacgccgctgtcgcgactctcaagaccaagcgcacc
atccagttcgtcgactggtgccctactggcttcaagcttggtatctgctaccaggctccc
cagatggttcccaatggtgacctcgccaaggtcagccgtgctgtgtgcatgctctccaac
accactgccatcgctgaggcttggtccgctctgtcgaccaagtttgacctcatgtactcc
aagcgtgcctttgtccactggtatgttggtgagggtatggaggagggtgagttctccgag
gctcgcgaggatctcgctgctctggagcgcgattacgaggaggttgctgccgactctctc
gagggcgaggagggccttgaggctgagtactaa
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