Colletotrichum higginsianum: CH63R_12962
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Entry
CH63R_12962 CDS
T08176
Name
(RefSeq) DNA polymerase mu
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CH63R_12962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_12962
Enzymes [BR:
chig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CH63R_12962
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
CH63R_12962
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
28872043
NCBI-ProteinID:
XP_018152353
UniProt:
A0A1B7XVQ2
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Position
9:complement(2495058..2497106)
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AA seq
602 aa
AA seq
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MALELPPVYLLPTHLKPDELHELEEKIPSLTYNIQEANIVIGKISQRERALFELRRGKVL
TDPIDATRISESPSATPRKRKRALSGSGSESTLYSEDGEKYGPVPMQTIKALANKSGNTN
IVKVVKLAWLTDSLAQGEILPLRNYLLYEGRKKGTSETPTTAKGNGILSRAATDDLWQTH
NSVCLEERRKYPADMHQATPSLLRQTTSEHDSVLKLPPIPSFLGSTFACQRPTPVDPPNG
IFVDELKKIRLNRKMVGDQIGVRAYSTSIATLSAYPYAIATPQEVARLPGCGVKVAELWH
EWKESGRLCEVDEAQADPRLSVVKKFYDIWGVGDITARDFYNRVESIADTILVHARNINP
GFELVIVGGYRRGKQGSGDVDVVISHRDESATLHFVNKLVVSLEKSRHITHTLTLSNHNS
ERGQRPVSWKGNESKGSGFDTLDKALVVWQELEIESHKRYPKETKEKPHRRVDIIISPWK
TVGCAVLGWSGDTTFQRDLRRYCKKQKSFKFDSSGIRSRVDGSWIDLEGGKLGKAPDMLT
AEKRVFEGLGLEWVHRVKRRIPPCGRSCGEAEVKMACWIPPAFHWEESAPDAPKRAQSPF
AA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggctcttgaacttccgcctgtctatcttcttcccactcacttgaaaccagacgaacta
cacgaactcgaagaaaagatcccaagcttgacatataacatacaagaagccaacattgtc
attgggaaaatctcccagcgagaaagggcacttttcgaacttagacgcggaaaagtgctg
accgatcccatagatgcgactagaatctctgagtcgccatccgcaactcctcggaagcgc
aagagggcactgtctggtagtggtagcgagtcgaccttgtacagtgaagatggagaaaag
tacgggccagttccaatgcagaccataaaggctcttgcgaacaagtctggcaacaccaat
attgtcaaagttgtaaagcttgcatggctcacggactctcttgcgcaaggcgagattctt
ccgcttcgcaactatcttctttatgaaggccgcaagaagggtacgtccgagacgcctacc
acggccaagggaaatggcatattatctcgcgctgcaaccgacgacctctggcaaacacac
aacagcgtctgccttgaagagaggagaaaatatcctgcggacatgcatcaagcaacgcct
tcgctgcttaggcagacgacctcggagcacgattcagtgcttaagctgccaccgatacca
tcgttcctcgggtcaacgtttgcctgtcaaagaccgacccctgttgatcctccaaatggc
atatttgttgacgagttgaagaagatacggcttaatcgaaaaatggtgggcgatcaaata
ggggtgagggcctactcgacatccatagcaaccctatcagcatacccttatgcgattgcc
acgccacaagaggtggcaagactccctggctgtggtgttaaggttgccgagctgtggcat
gagtggaaggaatctggcaggctttgtgaagtagatgaggcccaagccgatcccaggctg
tcagtggtaaaaaaattttacgatatctggggagttggcgacatcacggctcgagatttc
tataatagagttgaatctattgctgacaccattctggtacatgcccgcaacatcaatccg
gggttcgagctagtcattgtcggtggttaccggcgtgggaaacagggcagtggggatgtc
gacgtagtgatcagccaccgggatgagtctgctacgttgcacttcgtcaacaaattggtc
gtgagcttggagaagagccgacacatcacacacacgctcacgctgagtaatcacaacagt
gagcgtggccagcggcccgtcagttggaagggcaacgagtcaaaagggagcggtttcgac
acccttgacaaggcacttgtggtgtggcaggagctcgagatcgagagccacaagaggtat
ccaaaagaaacgaaagagaagccgcaccggcgggtggacatcatcatcagcccctggaag
acggttggatgtgcagttctaggttggagcggcgacacaacgtttcaacgagacctgcgt
cgttactgcaagaagcagaagagcttcaagttcgatagcagcggtatccgaagccgagtt
gatggtagctggatcgacctggaaggcgggaagctcgggaaagctcctgacatgctgact
gccgagaagagagtatttgagggtcttggcctcgaatgggtgcaccgggtgaagaggagg
atacccccctgtggcagatcttgtggtgaagcggaagttaaaatggcgtgctggatcccg
ccagcttttcattgggaggaaagcgctccagacgccccgaagcgcgctcaatcacctttc
gcggcttga
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