Colletotrichum higginsianum: CH63R_12978
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Entry
CH63R_12978 CDS
T08176
Name
(RefSeq) SNARE domain-containing protein
KO
K08489
syntaxin 16
Organism
chig
Colletotrichum higginsianum
Pathway
chig04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
CH63R_12978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_12978
Membrane trafficking [BR:
chig04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
CH63R_12978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF2207_C
Syntaxin_2
MCPsignal
GCP_C_terminal
Spectrin_Anc-1_2
FeoB_associated
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
28872059
NCBI-ProteinID:
XP_018152369
UniProt:
H1VK74
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Position
9:2546159..2547342
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AA seq
352 aa
AA seq
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MWRDRTNLYISYRQSYAHHPTKRTKYSGAAGGNSFGDAFPGNSSYASGNDDTRGLLSAGA
FEDDGDAVIEMDLLPPRWADVSDEITDLLADIATKSQVLERLHQKHVLPGFNDDDAKKAE
EREIETLTQQITKGFHDCHRCIQRVEQMVRESKHAGTITGAEETMAKNIQTSLASRVQDS
SALFRKKQSAYLKKLRGMSGLSSGAGVPGDRGSTPQPSSSYMDPSMLESDADRSFSQSTL
QATQQKLLQSNDAAIIQREREIEDIAQGIIELADIFRDLQNMVIDQGTMLDRIDYNVERM
TTDVKGAEKELVVAAGYQKKTTKRKIILLLILIIAGMIILLVIKPKKHGGDE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgagatcgcacgaacctttatatttcctatcggcagtcatacgcgcaccatccg
acgaaacggacgaagtatagtggtgccgccggtgggaatagcttcggtgatgcctttcca
ggaaacagcagttatgccagtggcaatgatgacacgcgtggcctcctctcggccggcgcc
ttcgaggacgatggagacgccgttatagaaatggacctcctccccccgcgttgggcggac
gtatccgacgagatcaccgacttgctcgccgacatagccaccaagagccaggtgctcgag
cgcttgcaccaaaagcatgtgctgccaggtttcaacgacgatgacgcaaaaaaggcagag
gagcgcgagatcgagaccctcacccaacagatcacaaagggctttcacgactgccatcgc
tgcatccaacgagtcgagcagatggttagggagtccaagcatgcgggaacgataaccggt
gcggaggagaccatggccaagaacatacagacatcactagcctcaagggtacaagattca
agcgcgctctttaggaagaagcagagcgcatatttgaagaaattgcgcgggatgagcggt
ctcagtagcggtgcaggcgtaccgggcgatcggggatcgacaccgcaaccttcgagctcg
tatatggacccgtcgatgctcgagtctgacgccgacaggtccttctcgcagtccacgctc
caggcaacgcagcaaaagcttctgcaatccaacgacgcggccattatccaacgtgagagg
gagatcgaggacattgcacagggcattattgagcttgccgacatattccgcgacttgcaa
aatatggtcattgatcagggtaccatgctggaccggatagactacaacgttgagcgcatg
actacggatgttaagggagccgagaaggagctcgttgtcgccgccgggtaccaaaagaag
acgaccaagcggaagatcatcctcctcctgattcttattatagcgggtatgatcattctg
ctcgtcatcaagccgaagaagcatgggggcgatgagtag
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