Colletotrichum higginsianum: CH63R_12993
Help
Entry
CH63R_12993 CDS
T08176
Name
(RefSeq) Tgf beta receptor associated protein
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
chig
Colletotrichum higginsianum
Pathway
chig04138
Autophagy - yeast
chig04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
CH63R_12993
04148 Efferocytosis
CH63R_12993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_12993
Membrane trafficking [BR:
chig04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CH63R_12993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
Motif
Other DBs
NCBI-GeneID:
28872074
NCBI-ProteinID:
XP_018152384
UniProt:
A0A1B7XVS5
LinkDB
All DBs
Position
9:complement(2596665..2600355)
Genome browser
AA seq
1192 aa
AA seq
DB search
MASEDPDDQTSSTSGSTNEKVRDDGPFVLRTLLEEVPLSAEGAADGIKINCVDYLDHNLY
VGTSASELLHFVQIPPDPNDPAGRPSFILASRLRPAFAETSNSRPGIQQILLLPKVGKAC
VLCNWTVTFYSLPEFSPVFGATQVKNCSWVGGVDLNDSQDDAGDPSAGVFICLSLMRRIQ
VVRIGEVARAVKNIDVPGTTISVRRDSIACVADARSYSLLDVDRQLRIPLMTISSLDDSQ
PAGEIGQAQDIAGSTDGGILRSASAAQNRPLLSAGDHHGHARSTSLGGLLTSGRRDPSPR
TADDRVAQGSSPPTPSASPRPSGEGPRPPPPTDKPLPAAPGSMRAEATPTMPTPVFLKPH
IVSPTAEEFLLVTGTGPLDPGIGMFVNLDGDPTRPTIEFDRYPREVVVDGGSSDLSPSKM
SPELDEEGYVIASMTKDSDAGLRHGLEIQRWDADGAEPETTKWWLEANPPGIHETTPLGI
RSLAGTDETHFEEIIDRLCQRKFSPFSGGLPETPIFSPRSADSRTASSLEQMTKERELFE
RDVDSQDEEALPEDWEHKRNAEEHDFARRLANANSRIAVWADDHIWWAIRNPMLLRLEAR
LEAACEQDGTFNPAMLDRDGIFTVLNSFRGQEAKSELEFVTFSYLRQRAGVLLLTNLLHA
AERPFTDAELKALEEVLVESSLDPRVVLSLLPGLRNEIVESRRGIWIFGGVKRTTQSYLD
SEHFRKASPTIGTLGSKVVQFLRRFLAAWRKKKGFGSVADESEVFQTVDAALLLVLLELD
QKSPMGLAKKTSSIRSELYDVVDKGVDCFDRAASLLESYHRLFVLSRLYQSRKMAGDVLA
TWRRIIEGEPDHGGELRDGEQRVREYLTKISSQALVREYGVWLASRNPKLGVQIFAEDKG
KAPRFDPAEVVEILREEAPDAVKYYLEHLVFGKGHTGYVNDLIAYYLDIVISDLDTSQES
RDAFAGTYTSYRALQAPKPTYRQFLTDNAPRDDEVWQSRLRLLQLLGGGHQYDAAAIRER
IAALPDELLVPEIIILDGRERRHEDAIRLLVHKLGDYDTAISYCLRGGSSIYTRPDGRRE
STPTHDMQARLFRAALGEFLAIEDVSDQIEQTGALLERFGGWFDVEDVLALVPDEWSVDV
VAGFLMTALRRITQERHETTVTKALSSAENLRVNHDLIAKVDEKGPSIEAPN
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgaggatccagacgaccagacctcgtctacgtctgggagcaccaatgagaag
gtccgcgatgatgggccctttgtcttgcgcacattgttggaggaggtgcccctgtcggcc
gagggcgccgctgatgggataaagataaactgcgtcgactacttggatcacaacctttac
gtcggcacgagcgcatccgaactgcttcactttgtccaaattcctcccgacccaaatgat
ccagctggacggccatccttcatactcgcatcacgattacggccagcatttgccgagact
agcaactcccgccccggcatccagcaaatactcttgctccccaaggttggaaaggcctgt
gtactctgcaactggaccgtcaccttttactccctccccgaattcagcccagtatttggg
gctacacaggtcaaaaactgcagttgggttggtggcgttgacttgaacgactctcaagat
gacgcaggcgatccctctgcgggagtcttcatctgcttgtcattgatgcggagaattcag
gttgtgagaataggggaggttgcgcgggcagtcaagaacattgatgtgcccgggaccaca
atatcagtccggcgagattccattgcatgtgtggcagacgccaggagctactccttgctt
gacgttgacagacagctgcggattcctctgatgaccatctcttcactggacgattcacag
ccagccggggagattggtcaagctcaggacatcgccgggagtaccgacggtggcatattg
aggagcgcctcggcagcgcagaaccggccgctcctgtctgctggtgaccaccatgggcat
gctagaagcacaagcctcggggggttgctcaccagcggacggagggaccccagccctcga
actgcagatgatcgcgttgctcaaggatcatcaccgccaacgccttctgctagtcccagg
ccctcgggtgaaggaccgcggcctccgccgccgacggacaagcctctacctgctgcgcct
ggaagcatgcgggcagaggcgacaccaacgatgccgacccccgtctttctcaagccacat
attgtctcgccaaccgccgaagaattccttcttgtcaccggcaccgggccattggatccc
gggattggcatgtttgtaaacctcgacggggatcccacgaggcccacaattgaattcgat
agataccccagggaagtcgtggttgacggtggatcatccgacctctcaccgtcgaagatg
tcaccggagttggacgaggaggggtacgttattgcgtctatgacaaaagactctgacgcg
ggattgcgccacggcctggagattcaaagatgggatgccgacggagcggaaccagagact
accaaatggtggctcgaggcaaacccgccggggatacatgaaacgacaccgctaggtatt
cgatcacttgcgggcaccgacgaaacccactttgaagagatcatcgacagactctgccag
aggaagttctcgcccttttctggagggctccccgaaacccccattttttcgccgaggagt
gccgactcacgcacagcgtcgtccttggaacaaatgacaaaggagcgagaactgtttgag
cgagacgtcgattcacaggacgaggaggctctacccgaagattgggaacacaaaagaaac
gccgaggagcatgattttgcacgacggctggcgaatgccaactcgaggattgcagtatgg
gcggatgatcacatctggtgggcgattcgcaaccccatgctgctacggctggaagcaaga
ctggaagcggcgtgcgagcaggatggcacgtttaaccctgcgatgttggaccgagacgga
atcttcacggtgctcaactcattcaggggacaagaggccaagtccgagttggagttcgtt
accttcagttacttgcgacagcgcgctggggttctgctccttaccaacttactgcatgcg
gcagagaggcccttcacagacgcagagctaaaggcgttggaggaggtccttgtagaaagt
agcctggatcctcgggtcgtcctgtcattgctacccggtcttcggaatgagattgttgag
agccgcagagggatttggattttcggcggcgtcaagagaacaacgcaaagctacctagac
agcgagcacttcagaaaagccagccccacgataggaactcttggcagcaaggttgtgcag
ttcttacggcggtttttggctgcatggaggaagaaaaaagggttcggcagcgtggcggac
gaaagcgaggtgttccagacggtcgatgctgcgttgttgttggtccttctcgagcttgac
cagaagtcgcccatgggactggcgaagaagacgtcgtcgattagatcggagctgtacgac
gttgtcgacaagggggtcgactgcttcgaccgagccgcctcccttttggaatcgtatcac
cgtctatttgtgctcagccggctgtaccagagccgcaagatggcaggagacgttctcgcc
acctggcgacgtatcatcgagggcgagccggaccacggcggggaactgcgtgatggcgag
caacgcgttcgggaatacctgacgaagatcagcagccaggctctcgtgcgggagtacggt
gtttggctcgcaagtcgcaacccaaagctaggtgtgcagatctttgcggaggacaagggc
aaggcgcccaggttcgacccggcagaggttgttgagattctgcgcgaggaggcacccgac
gccgtgaaatattacctcgagcatctggttttcggcaagggccacactggctacgtcaac
gacctcattgcgtactacttagacattgtcatcagcgatctcgacacctcccaggagagc
cgagacgcgttcgctggcacatacacatcctaccgagcattgcaggcccctaaaccaaca
tatcgacagttcctcacggataacgcccccagggatgacgaggtctggcagagtcgccta
cggctgctacaattgctcggagggggccaccaatacgacgcggcggcaatcagggagcgc
atcgctgcactgccagacgagctccttgtacccgagatcattattctcgatggccgagag
cgacgtcacgaggatgctatccggctcctcgttcacaagctgggcgactacgacacggcc
atctcgtactgtctgcgcgggggctccagcatctacacgcgtcccgacggcagacgggag
agcacgccgacgcatgacatgcaggcgcggctattccgggcggcgctcggcgagttcctc
gccatcgaagacgtcagcgatcaaattgagcagacgggcgccctgctcgaacggtttggt
ggttggttcgatgtcgaagacgtcctcgcccttgtccccgatgagtggtccgtcgacgtc
gtggccgggttcctcatgacagcgctgcggcgcatcacgcaggagcggcacgagacaacc
gtgactaaggcgctcagctcggcagagaatttgcgcgttaaccatgacttgatcgcgaaa
gtggatgaaaagggcccgtcgattgaggcccctaattag
DBGET
integrated database retrieval system
