KEGG   Colletotrichum higginsianum: CH63R_13040
Entry
CH63R_13040       CDS       T08176                                 
Name
(RefSeq) WD repeat domain-containing protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
chig  Colletotrichum higginsianum
Pathway
chig03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CH63R_13040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chig03021]
    CH63R_13040
   03036 Chromosome and associated proteins [BR:chig03036]
    CH63R_13040
Transcription machinery [BR:chig03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     CH63R_13040
   Coactivators
    SAGA/TFTC/STAGA complex
     CH63R_13040
Chromosome and associated proteins [BR:chig03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     CH63R_13040
    STAGA complex
     CH63R_13040
    TFTC complex
     CH63R_13040
    SAGA complex
     CH63R_13040
    SLIK complex
     CH63R_13040
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 TFIID_NTD2 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_IFT140_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Tricorn_2nd eIF2A Nucleoporin_N Beta-prop_Vps41 RAB3GAP2_N WD40_RFWD3 LisH Beta-prop_Nup120_160 Beta-prop_DCAF12 VPS8_N
Other DBs
NCBI-GeneID: 28872121
NCBI-ProteinID: XP_018152431
UniProt: A0A1B7XVZ5
LinkDB
Position
9:complement(<2767591..>2770552)
AA seq 810 aa
MSGNPGQPGASSTTPGAPGAPGGGGAGAGASGSFSQQQQQPATTTPGAGAAAPAPTPVSQ
TPIPPPTTATPAPAPATAPMSNQNLNQISEGAHGLVTSGGSAISGVTDYLLKRGYTRTET
IFRQESSHLGPDGRPIHNKVDDLGPRKYLKAFNLLREWVENNLDIYKFELNKLLWPVFVY
SWLELVTQNYSEDAKSLLNNLKPYFENVHSDDLKTFSTITLALHAKENSTTKLYRENKYR
IPLNQHITGNLFHFLERERDNGGSVILYILSTFCHLDSTARGPIEPFSFEAIYRRSQNLD
IDEIDLQEGIPGVFTGISNRDLLDKTVPLKLGPLPMEEDLREDVRAELQDEDALNPPPEG
RSTLVEEFDRKIKREESADGPNRAELPLPPSRARDVVMEMQKVRENRDRFKIEGRTGGVG
VAASACMFTFHNTLGSVSCMDFSKDHEMVAIGTTDSYIRVWHLEGKPLKSKRADEKDFKF
NNRKLIGHSAQVFSVSFSDAIAKLDHAPFGEEGKGEGPIETSSKLLLSCSADGTVRIWSL
DIWACVCVYKGHDGPVMRAEWGPHGHYFLTGGWDKTARVWMQDHASAQRILVGHDSSISA
VAWHPNGTYVFSASDETDKSIRMWSVITGQCVRVFTGHTDYISAIECAPNGKILATADNS
GNIFFWDIQKGSRIKRSRGHGKGGIWSLSFSVESNVLVSGGQDGTVRVWDVDLPAEGHKV
VQPQPGTAPTQEGGDTIVAATGQTERANASGQGATGSGSNAPGGSKKKGKEVMITPDQIS
AFPTKKTPVMKVQFTRMNLIVAGGCYDPDR
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgtcgggaaacccgggccagcctggtgcgagcagcaccaccccaggcgccccaggcgcc
ccaggcggcggcggcgcaggagcaggcgcgtcaggatctttttcacagcagcagcaacag
cccgcgacgacgacgcccggtgcaggtgctgcagctcccgcgcctacacccgtgagccag
acacctatccctcctccgacgaccgcgacgcccgcgccggcaccggctaccgcgccaatg
tcgaaccagaatctgaaccaaatttcggaaggcgcccacggtctagtgacgtccggcgga
agtgccatatctggggttacggactacctcttgaagcgtggctacacgcgtacagagacc
atcttccggcaggagtcgtcgcatttggggccggatggtcgtcctatccacaacaaggtg
gacgacctaggcccgcggaagtatctgaaggccttcaatttgctgcgcgagtgggttgaa
aacaacctcgatatttacaaattcgagttgaacaagctcctctggcccgtgttcgtctat
tcatggctggagttggtcacgcagaattactccgaggacgccaagagcctcctcaacaac
ctaaagccgtacttcgagaatgtccactcggacgacctgaagacgttctccacgatcact
ctcgctctgcacgcgaaggaaaactctactaccaagctttaccgcgagaacaagtaccgc
atcccgcttaaccagcacatcaccggcaacctcttccacttcctggagcgcgagcgggac
aatggtggctcagtcatcctgtacatcctctcgaccttctgccacttagactccaccgcc
cgcgggcctattgagcctttcagcttcgaggccatctaccgccgtagccagaatctcgac
atcgacgagattgacttgcaagagggtatccccggagtcttcactggcatctcgaacaga
gacctgctagacaagacggtccctctcaagctaggtccccttcccatggaggaggacctc
cgtgaagatgtcagagccgagcttcaagacgaggacgcgctgaacccgccgcccgaaggc
cggtctactctggtcgaagagttcgaccgcaagatcaagcgagaggagagcgcagacggc
cccaacagagccgagcttcctctccctccgtctcgcgcccgtgatgtcgtcatggagatg
cagaaagttagagaaaaccgtgaccgtttcaagattgagggacgtaccggcggcgtcggc
gtcgctgctagcgcgtgcatgttcacattccacaacacgctcggaagcgtatcatgcatg
gacttctccaaagatcacgaaatggttgccattggcaccacggactcctacatccgcgtc
tggcacctcgagggcaagcccttgaagtcgaagagagccgacgagaaagacttcaagttc
aacaaccgcaagttgatcggtcactctgcccaggtcttctcagtctccttctctgacgcc
atcgccaagcttgatcatgcgccatttggcgaggagggtaagggcgagggtcctatcgag
accagctccaagctcctgctgtcttgttcggccgacggcactgttcgtatctggtcccta
gacatctgggcttgcgtctgcgtctacaagggccacgacggccccgtcatgagggccgag
tgggggcctcatggccactacttcttgaccggcggctgggacaagacggctcgagtctgg
atgcaagaccacgcttctgcacaacgcattctcgtcggccatgactcgagcatttcggca
gtcgcctggcatcccaacggaacgtacgtcttttcggcctcggacgagacggacaagtcg
attcgaatgtggtctgtcatcacgggccagtgcgtccgtgtctttacaggccatacggat
tacatttcggccatcgagtgtgcacccaatggcaagatcttggccacggctgacaacagc
ggcaatatcttcttctgggatatccagaagggctcgcgcatcaaacggtcacgtggccat
ggcaagggcggtatctggtccctaagtttcagcgtcgagtccaacgtcctggtctctggc
ggccaagacggcacggtccgtgtctgggacgtcgatctgcctgccgaaggccacaaggtt
gtgcaaccgcagccaggcacggcacccacgcaggagggaggtgatacgatcgtcgccgcc
acgggacagacggagcgagccaatgcgagcggtcaaggggcgactggcagtggttccaac
gcgcccgggggcagcaagaagaagggcaaggaagtgatgattacgcccgaccaaatcagc
gcgttcccgactaagaagacacccgtgatgaaggtgcagttcacacgcatgaacctgatt
gtggctggcggttgctacgatcctgaccgctaa

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