Colletotrichum higginsianum: CH63R_13387
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Entry
CH63R_13387 CDS
T08176
Name
(RefSeq) Pectate lyase B
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_13387
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CH63R_13387
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
28872468
NCBI-ProteinID:
XP_018152778
UniProt:
H1VLZ3
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Position
9:3863913..3865028
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AA seq
325 aa
AA seq
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MKFSAVSFMAALAAASPTNTINARNELALRQAAEACNIGYCTQNGGTTGGAGGTSVTVKT
VEELVAAAKQEGPLTIVISGAISGSAKVRVSSDKTIIGEKGSSLTNVGLYVRRVKNVIIR
NLKIGGVKASNGDAIGIDESTNVWVDHCDLSGDLSGGKDDLDGLLDVSHGADWITVSNVY
FHDHWKGSLVGHSDSNAGEDTGKLHVTYANNHWFNINSRAPLVRFGTVHVVNSYYSKLLL
TGVNTRMGAQVLVQSSAFANCPAEAIFFADSKQTGYAVADDVDLGGSKNLAPQGTLTADK
LPYKIAAIGSSKVASTIPGTAGQKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctccgccgtttccttcatggccgccctggctgcggcgtcgcccaccaacacc
atcaacgcccgcaacgagctcgcccttcgccaggctgccgaggcttgcaacatcggttac
tgcacccagaacggcggcaccaccggtggtgccggcggtaccagcgtcaccgtcaagacc
gtcgaggagctcgtcgccgctgctaagcaggagggcccccttaccattgtcatctctggt
gccatctcgggcagcgccaaggtccgcgtctcttccgacaagaccatcatcggagagaag
ggcagctccctgactaacgtcggtctctacgtccgccgggtcaagaacgtcatcatccgc
aacctcaagattggcggtgtcaaggcctccaacggcgacgccatcggcatcgacgagtcc
accaacgtctgggtggaccactgcgacctgtccggtgacctgagcggcggcaaggacgac
cttgatggtctcctcgacgtttcccacggtgccgactggatcactgtctccaacgtctac
ttccacgaccactggaagggttctctggttggtcactccgacagcaacgccggggaggac
acgggcaagctccacgtcacctacgccaacaaccactggttcaacatcaactctcgcgct
cccctcgtccgcttcggaactgttcacgtcgtcaactcctactactcgaaactcttgctc
acaggcgtgaatacgaggatgggcgcccaggttttggtccagagctccgcatttgccaac
tgccctgctgaggccatcttctttgccgactcaaagcagactggatacgctgttgctgac
gatgtcgaccttggcggctccaagaaccttgctcctcagggaacgcttaccgcggacaag
ctcccctacaagattgctgccatcggctccagcaaggtcgccagcaccatccccggcacc
gctggccagaagctgtaa
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