Colletotrichum higginsianum: CH63R_13432
Help
Entry
CH63R_13432 CDS
T08176
Name
(RefSeq) Cyclin ccl1
KO
K06634
cyclin H
Organism
chig
Colletotrichum higginsianum
Pathway
chig03022
Basal transcription factors
chig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CH63R_13432
09124 Replication and repair
03420 Nucleotide excision repair
CH63R_13432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chig03021
]
CH63R_13432
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_13432
Transcription machinery [BR:
chig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CH63R_13432
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CH63R_13432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
28872513
NCBI-ProteinID:
XP_018152823
UniProt:
H1VJI3
LinkDB
All DBs
Position
9:4040928..4042201
Genome browser
AA seq
374 aa
AA seq
DB search
MATEDARYRLSTQYRLWSFSPSKLAELREQTNSLARTHIASRLIETKRVDIDVEPLPEFL
TPAEEIQLLKVFTVDLIRAADFCGMPTEVRATATVFLRRFYVTNSIMTYPPQDVLKTCLF
FGSKAEGQYMRLAKLAEKFPNTTEEEILAGEFLLCQGVRFAFDVRHPFRALEGAILELRR
HTDLEKARIDTAHARARAVLKFSSLVTDAYFHYTPSQIMLAALSLADRGLTERLVQGAFT
PNQNATSNENGTDSTPRHELRDKVMGAIEACREMLATEPPERLDEYWGTPESTKLIKPLL
RKLKKCRDPDRADLVALQKARRELASQKESRRPKAEGDGAVFSGDGGGLNGNDARDAKRR
KVGEGDDVFGPALG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgaagatgcccgataccgactctcgacgcaatatcgattatggtccttctcg
ccatcgaagctggcagaactgcgcgaacagacgaattcgctcgcccgaacccacattgca
agtcgcctcatcgaaacaaaacgggtcgatatagatgttgagccgttgccggaattcttg
actcctgcagaagaaatccaactgctgaaggttttcacggttgatctgatccgcgcggcc
gatttttgcggcatgcccaccgaagtcagggcaactgcgaccgtttttctgcgccgtttt
tatgtcaccaattcaatcatgacgtacccgccccaggacgttctcaagacgtgcttgttc
ttcggaagcaaggctgaagggcagtacatgcggcttgccaaactcgcagagaagttccca
aatacaaccgaggaggagattttggctggggagttcctgctctgccagggtgttcgattc
gcgtttgatgtccgacatccgttccgtgcgttggagggagctatactggagcttcggcga
cacactgatctcgagaaggctcgaatcgacacggctcatgctcgtgcccgggctgttctt
aagtttagctctctcgtcaccgatgcctacttccactacacgccgagccagatcatgctg
gctgcgctttcgcttgccgaccggggactgaccgagagactggtccagggagcgtttacc
cccaaccagaacgctacatcgaacgaaaatggaacagattcgacaccacgacacgagtta
cgagacaaggtgatgggcgcgatagaagcatgtcgagagatgttggcgactgagccccca
gagagactagacgagtattggggaacacccgagagcaccaagctcatcaagccgctttta
cgaaagctcaaaaagtgcagagaccccgatcgtgcagatctcgtggctctgcagaaggct
cggcgcgagttggcatcgcagaaggaatctcggcgtccgaaggccgagggcgacggtgcc
gtgttcagcggagatggcggaggactcaacgggaacgatgcgcgagacgccaagcggagg
aaggtcggcgagggcgacgatgtctttggtccagcgttgggatag
DBGET
integrated database retrieval system
