Colletotrichum higginsianum: CH63R_13819
Help
Entry
CH63R_13819 CDS
T08176
Name
(RefSeq) DNA-directed RNA polymerase
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
chig03029
]
CH63R_13819
Enzymes [BR:
chig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CH63R_13819
Mitochondrial biogenesis [BR:
chig03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
CH63R_13819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Drc1-Sld2
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
28872900
NCBI-ProteinID:
XP_018151111
UniProt:
A0A1B7XS40
LinkDB
All DBs
Position
10:complement(1174072..1178274)
Genome browser
AA seq
1400 aa
AA seq
DB search
MLLRNGRRSLSLHHAAVFRPLRPTPRFPLTAIAASQRPARCFGTQQQPARPTTTRTSLSA
GRNLATSVDEHQSADSSKYDRLASSILPPYGNGSTRQSIHELRPFDPSSPLVLDGPMEDD
TPRKKMNRLGVSGNLDEMLLVFDACLRVGKVDRAELILKRMALYNFLPGEELIFLYNRYL
RTSLEQLRLHPDSEQAAKLHKWYVLNIRSKGLPQTAETVACMVKASLLSERSHSNRDALI
THYMSLAPGEAGLHVLSMADILSDKDLAIITKIFPDYNIAPQPRPDSSNAIQPEAHAEPS
ALGELSRKAGEADQPQSMPEVLATPQKGFGLKTLKHTLSLFDEIPQNCDISTLPLRERRE
IQARLERDCIDAAVNRWREENESLQKMGLNTAVSHATLNSRLYDWQLALEARFKEEMVAI
EAAETAVKKSPADYDRCIYGPFLRLSTPTRLAAVTILGALSSTVITGIDRGMPLSAAIVS
LAKMTEEDIRDQAATQKKTAQKPKSRRMVMSPTPTNVANDKRSAEETSNHFSQLSETAVA
DKPWPVAVRAKVGAALLSALIETAKIKVVKEHPETKALVSQYQPAFSHVSRLKKGKKTGM
ILLNKELVNIMKREPQGDYLAKHLPMVVEPEPWQAFDKGGFLESRANLVRIKQGDKDQKL
YSEAAIARGDMDQVFKGLDVLGKTPWRVNTPVLNVMLAAWNTGEALANLPALNPNIPIPR
EPEATNDPLAHRAWVRAVRAAENERGGMHSVRCFMNFQLEIARAFRNQTFYFPHNIDFRG
RAYPLPTYLNHMGADHVRGLLRFANGKELGEEGLKWLKVHVANVFGFDKASLKERESFAM
DNLVNIFDSANNPLDGTRWWLKAEDPWQCLATCFELKAALESPEPTKFVSHLPVHQDGTC
NGLQHYAALGGDSWGARQVNLEPGDKPADVYSAVANIVKEHIAKDAESGNVIAVALRDKI
TRKVVKQTVMTNVYGVTFAGAKKQVCKQLDSLYPDLPKESGFDNIITSSYVATLVFKALS
SMFRGAHDIQYWLGEIGGRVCRALSAEQLERIKNDNILPSSSATAKAGDRKTTTDDILAQ
FRATIVWTTPLRMPISQPYRKSGTRCIKTSLQDLSLIIPERSDPVHRRKQLQAFPPNFIH
SLDATHMLLSALECHELGLDFAAVHDSFWTHASDVNTMNRVLRDAFIRIHEEDVVGRLAA
EFEARYRGSIYLAKINSGTPVEKKITALRKKFKMSTRDELLAEYKRQTLLRSLDPEQVAE
GKKMVTPASIFEEMSANESLAEPEDMEGLGLGSISDKEGLDLADDEIGESEQGIDDEIAA
EAPEAEDEAAKDDSPGAKWMERLTENAKVSFFERTVVNQTKTKQKQAGAIQVWLPLTFPA
IPEKGDFDVQRLKKSEYFFS
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcaggaacggccggagaagcctttccctccaccacgcagccgtctttcgaccc
ctccgcccgacaccccgattccctctgaccgcaatcgctgcgagccaacgacccgctcgt
tgcttcggcactcagcagcaaccagctcgtcccacgactacgaggaccagtctcagcgct
ggacgaaacctcgccaccagcgtcgacgaacaccaatcagccgacagttccaagtatgat
agacttgccagctccatcttgccgccatacggcaacggctcgacacgccaaagcatccat
gaactacgaccgttcgatccctcctcgcccctcgttctggacggtcctatggaggacgac
acaccccgtaagaaaatgaacagattgggagtatcgggaaacctggacgagatgctactt
gtcttcgacgcttgtcttcgcgtcggaaaggttgaccgcgccgaactgatcctcaagcgc
atggccctctacaactttttgcccggcgaagagctcattttcctatacaaccgatacctc
cgcacctctctcgaacagttgcgcctgcatcccgacagcgaacaagcagcgaagctccac
aagtggtatgtgctgaacattcgctctaagggtctccctcagaccgccgagaccgtcgcc
tgtatggtcaaggcctcgctgctctcggagcgctcccattccaatcgcgatgccttgatt
actcactacatgagcttggctcccggggaggccggtctccacgtcttgtcgatggcagac
atcctcagcgacaaggaccttgctatcataaccaaaatcttcccggattacaatatcgcc
ccccaaccacgacccgactcatccaatgccattcaacctgaagcacacgccgagccttct
gccctcggagaactgtcccgcaaggccggtgaagccgatcagccgcagtctatgcccgag
gtcttggccacgcctcagaagggctttgggttgaagaccttgaagcacaccctgagtctg
ttcgacgagattccccagaactgcgatatctcgactttgcccctgcgcgagcggagggaa
atccaggctcgcctcgagcgcgactgcatcgacgccgccgtgaaccgttggcgcgaggag
aatgaatcgctgcaaaagatgggtctcaacacagccgtctcgcacgcgaccctgaactcg
cgactctacgactggcaactcgcgttggaggctcggtttaaagaggaaatggtcgcaatc
gaagccgccgagaccgccgtgaaaaagagtcccgcagactacgatcggtgcatctacggg
ccttttctgcgtctctcgaccccgacccgtctcgctgccgtcaccattctgggtgctctg
agctcaaccgtcattaccggcatcgaccgaggcatgcccctttcggcagccattgtcagt
cttgctaagatgaccgaggaggatatccgagatcaagctgcgacgcaaaaaaagacggca
caaaaaccgaaatccagacgaatggtcatgtcaccaacgcctaccaacgtggcgaacgac
aaacgatcggccgaggaaacaagcaaccatttttctcagctcagtgaaaccgccgtggcc
gacaaaccatggccggtcgccgtccgggcaaaggtcggcgcggcgctgctctcggccctc
atcgagacggctaagatcaaggtggtgaaggagcaccccgagaccaaggccttggtcagc
cagtatcagcccgccttctcccacgtcagccggctaaagaagggcaagaagaccggcatg
atactgttgaacaaggagctggtcaacatcatgaagcgagagccccagggcgactatctt
gccaagcacctgcccatggttgtcgagcccgagccgtggcaggccttcgacaagggcggc
tttttggaaagcagggccaatctggttcgcatcaagcagggcgataaggaccagaagctg
tacagcgaggctgccatcgctcgcggagacatggaccaggtattcaagggcctggacgtc
ctgggcaagacgccatggcgcgtcaacacccccgtcctcaacgtcatgctcgccgcttgg
aacacgggcgaggcgctggcaaacctgcccgcgttgaaccccaacatccccataccccgc
gagcccgaagcgaccaacgacccgctggcgcacagagcctgggtcagggcagtcagggcg
gccgaaaacgaacggggcggtatgcactcggtccgctgcttcatgaacttccagctggaa
atcgcgcgggccttcaggaaccagaccttttacttcccccacaacatcgacttccgaggc
cgcgcctatccgttgccgacctacctcaaccacatgggtgccgaccacgtccgaggcctc
ctccgttttgccaacggcaaagagctgggcgaggagggccttaagtggctcaaggtccac
gtggccaacgtcttcggtttcgacaaggccagcctcaaggagagggagtcgttcgccatg
gacaacctcgtcaacatcttcgactcggcaaacaacccgctcgacggcactcggtggtgg
ctcaaggccgaagacccgtggcagtgcctcgcgacctgtttcgagctcaaggccgctctc
gaatctccggagccaacaaagttcgtctcccatctccctgtacaccaggacggcacttgc
aacggtctccagcattacgccgccctcggcggtgactcgtggggtgctcggcaggtcaac
ctcgagcctggcgacaagcctgccgacgtctactcggccgtcgccaacattgtcaaggag
cacatcgccaaggacgccgagtcgggcaacgtaatcgccgtggccctgcgtgacaagatc
accagaaaggttgtcaagcagaccgtcatgaccaacgtctacggcgtcacctttgccggc
gccaagaagcaagtttgcaagcagctcgattcgctgtacccggacctgcccaaggagtct
ggctttgacaacatcattacctcctcctacgtcgccacgcttgtgttcaaagccctttcg
tccatgttccgcggcgcccacgacatccagtactggctcggcgagattggcggccgcgtc
tgccgagccctttccgccgagcagttggagcgaatcaagaacgacaacatcctaccctcg
tcgtccgccacggccaaggccggtgacagaaagacgacgacggatgacatcctggcccag
ttccgcgcgaccatcgtctggaccacgcccctccgcatgcccatctcacagccgtaccgc
aagagcggcacccgttgcatcaagacgtcccttcaggatctgtccctgatcatccccgag
cgctccgaccccgtccatcgcaggaagcagcttcaggccttccctcccaactttatccat
tccctcgacgcgacgcacatgctgctatctgctctcgagtgtcatgagctcggcctcgac
ttcgctgccgtccacgactcgttctggacccacgcctccgacgtcaacaccatgaaccgt
gtcctccgtgacgcctttatcagaatccatgaggaggacgtcgtcgggcgtctcgccgcc
gagtttgaggcccggtaccgcggatccatctacctcgccaagatcaactcgggtacgccc
gtggagaagaagatcacagcgcttcgcaagaagttcaagatgtcaactcgcgatgaactt
ctcgccgagtacaagagacagacgctcctccgttccctcgacccggagcaggtcgccgaa
ggcaagaagatggtgacgcccgccagcatctttgaggagatgtcggccaacgagtccctc
gccgagccggaagacatggagggtctcggactcggttccatctccgacaaggaaggccta
gacctggccgatgacgagatcggcgagtctgaacagggcatcgatgacgagatcgccgcg
gaagctcctgaggccgaggacgaggccgctaaggacgattcgcccggagccaagtggatg
gagagattgacggagaacgcaaaggtctcattctttgaacggaccgtcgttaaccagacc
aaaacaaagcagaagcaggccggcgccatccaggtgtggctcccgctgactttcccggcc
atccccgagaagggcgactttgatgtccagaggctgaagaagagcgagtacttcttctcc
taa
DBGET
integrated database retrieval system