Colletotrichum higginsianum: CH63R_13893
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Entry
CH63R_13893 CDS
T08176
Name
(RefSeq) Non-repetitive/WGA-negative nucleoporin
KO
K14312
nuclear pore complex protein Nup155
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_13893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_13893
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CH63R_13893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Phasin_2
YihI
ADSL_C
Motif
Other DBs
NCBI-GeneID:
28872974
NCBI-ProteinID:
XP_018151185
UniProt:
H1UWZ1
LinkDB
All DBs
Position
10:<1375091..>1379447
Genome browser
AA seq
1405 aa
AA seq
DB search
MSYPQMTPVRPVPGAFFNTPAASRFASDNEPARRRLFAESDTAQGSSTSGGSGALVGSSN
LAPAAVSSSTTAGAGLVSTSSSQPTQQNLPPVTRAAQAVNQFLQSDENYPELDSYCRPGA
SSEYDFSTLDSPWAPFHKTQMYPIPNQVFSHYNTGQLQTLMGLFAEINHAWVVIDNSLFL
WDYTHPDPELIGFEDQPHTIHAVALVAPKPGIFVNTITHILVVATSSEMILLGLSAEPTP
SGTKTVSLYSTKLNLPLRGTDVRVIAGTADGRIFFGGSNDTDIHELYYQQEEKWFSNRCG
KINHTNPGWSSVVTLQSGFWAPKSPEGLQSIVIDDSRKLVYTLSTRSTIRTYHMDGPNKL
TKVIEKERNACLRDITHMITQSPLLNDRTTFVSISAIPSREASKLHLMALTNTGCRLFLS
ATSSASYMIGGVSSNTPPQSMQVQFIKFPPSDKPGRSGTNSAGDAVIDLGSRALELSRLG
ARFAPGYFLDFVVKENDPNIDLLFVSAPETGRIKANSSSSALKYYEHGNWIDIGSRAEDV
GLVTKPFAAAKQPVGFGNELAVQFDEPSTEFAVLTNTGVHIIRRRRLVDTFAAAIRGAVG
DEGLEMETRKFISRYGRVETISCALAVACGHGGDARPGATRAIDQATEDRARTVFVDFGG
QPTITEADGTPLNTTSVRLSPRHDALCVYLTRLIRTLWKNHVVSAAPNPAGGIAIQSMVP
VARLHSVQEQLERLRRFLDANKSFIQGLSGPSDLQRVASKQEEVALQAEHQALHALQKLM
ESISEGISFVLMLFDERVSDIFTRLDATAQQGLRNLTYESLFSQAPGRDLAKLLVKSIVN
RNIESGSNVETVADALRRRCGSFCSPDDVVIFKAQEQLKRASEQPLNSNPSRTLLHESLR
LFERVAGALSFANLHNAVSQYIELKYYAGAIQLCLTVAREKDRGNTALSWVHDGKPANDP
RASAFSERRKCYELIHEALQHLDAASSREPETIDGRLTLIGTKRLEAYSVVNDSDDEVFH
FDLYEWYIEQGWTDRILAIESPHVITYLQSLARTTVEHADLLCRFYTQRERYFEAAQVQN
DLAQSDFAIGIKDRITLLSKAKANANVATAGVGRQQQQVLAHEVSELLDIANIQDDLLER
LKADSRIAPERQAEIEEALDGQVISLSDLFNQYADQANYYDLCLLIYHSADYRNPNTIAQ
TWVSLVEQIHQEAVDRMEEAGPGIPVLPSPYESVSVKVQNIAHRTSLDSFIFPVPVLLPE
ICRYAVEYHQDAEIGADPTWPVQLFLSLGVSHDMVTRVLESVFDTQDYGFSGNNRNRVIE
LIVFTVDVWQREVKRRGGTSMKGDGAIGVWVKDLLSRCDNSLPPAGHGSNPGGMDLVEVR
RRLRTVRRDVDGLVERGPSGSLRFL
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgtcataccctcagatgaccccggtacggccggtaccgggtgccttcttcaacacgccc
gcagcttcgcgcttcgctagcgacaatgaacccgcccgacgacgcctgtttgccgaaagc
gatacagctcagggaagctcaacatccggaggcagcggcgccttggtcggatcatccaac
ttggctcccgccgcagtttcgtcgagcacaacagctggtgctggtctggtatcgacttct
tcgtcgcaacccacccaacagaatctcccgcccgtcacgagagctgctcaggcggtcaat
caattcctccagtccgacgagaactatcctgaactggactcctactgcaggccgggagcg
tcgtccgaatatgatttcagcacgcttgactcgccctgggcgccttttcacaagacccag
atgtacccgatcccgaaccaggtcttcagccactacaacactggccagcttcagaccctg
atgggcttgttcgccgagatcaaccatgcctgggtggtcatcgacaattcgctcttcctt
tgggactacacccaccccgaccccgagcttatcgggtttgaagaccaaccgcatacgatt
cacgccgttgctctcgttgctcccaagcccggcatattcgtcaacaccatcacgcatatt
ctggtcgttgcaacatcttccgagatgatcttgcttggcctctccgccgagcccacgccg
tcgggaacgaagacagtctctctgtacagcaccaagctcaatcttcccctccgaggaacc
gacgtcagagtcattgctggtactgccgatggccgtattttctttggaggtagcaatgac
accgatattcacgagctctattatcagcaggaggagaagtggttctccaaccggtgcggg
aagatcaatcataccaaccccggatggtcctcggttgtcacccttcaaagcggcttttgg
gcacccaagtctccggaaggcctccagagcatcgtcatcgacgactcgcggaagctcgtc
tacactctgtcgactcgatctacgattcgcacgtaccacatggatgggcctaacaagctc
accaaggttatcgagaaggagagaaatgcctgcctccgcgacatcacccacatgattacc
cagtctcctttgctcaacgaccggacgacatttgtttccatcagcgccattccctcccgg
gaggcatcgaagctccatctcatggccctcaccaacaccggctgccgactcttcctcagt
gccacaagctccgcctcgtacatgatcggtggcgtctcttccaacacgccccctcaaagt
atgcaggtccagttcatcaagtttcctccttccgacaagcccggaagatccggtaccaac
agcgccggtgacgccgttattgatttaggctcaagggcgttggagttgagcaggctggga
gctagatttgcgccaggttacttcctcgacttcgttgtaaaggaaaacgatcccaacatc
gatctcctcttcgtttccgcccccgagactggtcgcatcaaggcaaactcgtcctcgtcg
gcgctcaagtactacgagcacggaaactggatcgatatcggaagtagagccgaagatgtt
ggtttggtgacgaagccatttgctgccgccaagcagcccgtcggcttcggaaacgagctc
gcggtccagtttgatgaacccagcaccgagtttgccgttctcaccaacactggtgttcac
atcatccgtcgccgccgactggtggacacctttgctgctgccatccgaggtgcggtcggc
gatgaaggtttggagatggagaccaggaagtttatctcgcgctacggccgcgtcgagacc
atctcgtgcgccttggcagttgcttgcggacacggcggggatgccagacctggcgcgacg
cgtgcgatcgaccaagcgacagaagaccgcgcgcggaccgtgtttgtcgatttcggcggg
cagccaaccattaccgaggccgacggtacgcctcttaacacaacatctgtccgtttgtct
ccaagacacgacgctctctgtgtgtacctcactcgcctcattcgtacgctgtggaagaat
catgtcgtttctgctgctccaaacccggctggtggcatcgcgatccagtccatggtccct
gttgctaggcttcactccgttcaggagcagctggagcggcttcgcaggttccttgacgcc
aacaagagcttcatccagggtctctctggcccctctgacctgcaaagagttgccagtaag
caagaagaggttgctcttcaggccgagcaccaggcgcttcatgcgctgcagaagttgatg
gagagcatctcggaaggtatctctttcgtcctcatgcttttcgacgagcgagtgagcgac
atctttacaagactcgacgcaacggcccaacaggggctgaggaatctcacatacgaaagc
cttttctcccaagctcccggaagggacttggcaaagctccttgtcaagtccattgtcaac
cgcaacatcgagagcggctccaacgttgagaccgtggcagacgcactgcgcagacgctgc
ggcagcttctgcagccccgatgacgttgtcattttcaaggcccaggagcagttgaagagg
gcttctgagcagccgctcaatagcaacccttcccgcacccttttgcatgagagcttaaga
cttttcgagcgagttgccggcgccctctcctttgccaaccttcataacgctgtgtcccag
tacatcgagctcaagtactatgcaggtgccattcagctctgcttgaccgtggcccgcgaa
aaggacagagggaacaccgccctttcatgggttcacgatggcaagccagctaatgatcct
cgggcgagcgctttctctgagcgccggaaatgctacgaactcatccacgaagctctgcag
cacttggacgccgcatcaagcagagagcccgagactatcgacggccgcctgacgctgatc
ggcaccaagcgccttgaagcctacagtgtggtgaacgactcagatgacgaggtcttccac
ttcgacctctacgaatggtacatcgagcagggatggaccgacaggatcctcgctatcgaa
tcaccacacgtcatcacatacctccaaagtctggccagaacaacagtcgaacacgcggat
cttctttgcagattctacacacaacgtgagcgatacttcgaggccgctcaggtccaaaac
gaccttgcccaatccgacttcgccatcggcatcaaggacagaatcactctccttagtaag
gcgaaggccaacgccaatgttgccaccgctggcgtcggcagacagcaacagcaagtcctt
gcccacgaggtcagcgaacttctcgacatcgccaacatccaggacgacctgttggagagg
ctcaaggccgacagccgtatcgctcccgagagacaagccgagatcgaggaggccctcgac
ggtcaggtgatatcattatcagacttgttcaaccaatatgccgaccaagcgaactactat
gatttgtgtctcctcatctaccacagtgccgactaccgcaacccgaacacaattgcccaa
acctgggttagccttgttgagcagatccaccaggaggcggtcgatcggatggaggaggcg
ggacctggtatccctgttctcccctcgccatacgagtctgtgtcggtcaaggtgcagaat
attgcccaccgtacctcgttggacagcttcatcttccccgtgccggtcctcctgcccgaa
atctgccggtacgccgtcgagtaccaccaggatgccgagatcggcgccgaccctacctgg
cccgtgcagctcttcctcagtctaggcgtctctcacgacatggtcactcgcgtcctcgag
agtgtgtttgacacgcaagattacggcttcagcggcaacaaccgcaaccgcgtcatcgag
ctcattgtgtttaccgttgatgtctggcagcgcgaggtgaagcgccggggtggtacctcg
atgaagggggatggcgccatcggtgtctgggttaaggatctgcttagccgatgcgacaac
tcgctacctcctgctggacacggttcgaaccccggtggcatggacttggtggaggtgcga
agacgtctacggacggttcggagagacgtggacggcctcgtcgagaggggcccatctgga
agcttgcgcttcttgtaa
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