Chitinophaga agri: GWR21_02265
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Entry
GWR21_02265 CDS
T06416
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chih
Chitinophaga agri
Pathway
chih02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GWR21_02265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chih03021
]
GWR21_02265
Transcription machinery [BR:
chih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWR21_02265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_24
HTH_23
Sigma70_ECF
DUF2192
HTH_29
AEP1
SusR_C
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QHS58458
UniProt:
A0A6B9Z898
LinkDB
All DBs
Position
complement(585710..586261)
Genome browser
AA seq
183 aa
AA seq
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MMLKRGDMNAFDVLYARHWSAMYQTAWYLLRDESVCMDIVQDIFTWLWEKREQLDIQTVP
AYLRTAVRFKVANYIQAGKIREDFYEELSKLTISAGSGPQELLELNDLKTIIQEAVNGLP
EKCREIFLLSRDGQLTNQQIADLLDISLKTVEAQKTIAMKRIRAAVEPHLLALLIIPFVT
SYH
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaaagagaggcgatatgaatgcatttgatgtgctgtacgcccgtcattggtct
gccatgtatcagactgcctggtatctcctacgcgatgagagtgtatgtatggacatagta
caggacatttttacctggctatgggaaaagcgtgaacaactggatatacagacggtgccc
gcctatctgcgcaccgcggtcaggtttaaggtggccaattacatccaggccggaaagatc
agagaggacttttacgaagaactgtcgaaactaactatatccgccgggtcaggtccgcag
gaactactggaactcaatgacctgaaaacgatcatccaggaggcggtgaacggcctgcct
gagaaatgcagggagatcttcctgctcagccgcgacggacaactaaccaatcaacagata
gctgatttactggacatctcgctcaaaactgtagaagcacagaagactatcgccatgaag
cgcatccgcgcagcagttgaaccacacttgctggccctgcttattattccctttgtgacc
agttaccattaa
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integrated database retrieval system