KEGG   Chitinophaga agri: GWR21_02265
Entry
GWR21_02265       CDS       T06416                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chih  Chitinophaga agri
Pathway
chih02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chih00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GWR21_02265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chih03021]
    GWR21_02265
Transcription machinery [BR:chih03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GWR21_02265
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 GerE HTH_24 HTH_23 Sigma70_ECF DUF2192 HTH_29 AEP1 SusR_C HTH_11
Other DBs
NCBI-ProteinID: QHS58458
UniProt: A0A6B9Z898
LinkDB
Position
complement(585710..586261)
AA seq 183 aa
MMLKRGDMNAFDVLYARHWSAMYQTAWYLLRDESVCMDIVQDIFTWLWEKREQLDIQTVP
AYLRTAVRFKVANYIQAGKIREDFYEELSKLTISAGSGPQELLELNDLKTIIQEAVNGLP
EKCREIFLLSRDGQLTNQQIADLLDISLKTVEAQKTIAMKRIRAAVEPHLLALLIIPFVT
SYH
NT seq 552 nt   +upstreamnt  +downstreamnt
atgatgctaaagagaggcgatatgaatgcatttgatgtgctgtacgcccgtcattggtct
gccatgtatcagactgcctggtatctcctacgcgatgagagtgtatgtatggacatagta
caggacatttttacctggctatgggaaaagcgtgaacaactggatatacagacggtgccc
gcctatctgcgcaccgcggtcaggtttaaggtggccaattacatccaggccggaaagatc
agagaggacttttacgaagaactgtcgaaactaactatatccgccgggtcaggtccgcag
gaactactggaactcaatgacctgaaaacgatcatccaggaggcggtgaacggcctgcct
gagaaatgcagggagatcttcctgctcagccgcgacggacaactaaccaatcaacagata
gctgatttactggacatctcgctcaaaactgtagaagcacagaagactatcgccatgaag
cgcatccgcgcagcagttgaaccacacttgctggccctgcttattattccctttgtgacc
agttaccattaa

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